Identifiers and Description

Gene Model Identifier

Contig18346.0.g90

Standard Name

SKP1c

Aliases

Contig18346_0_g90

Description

Skp1 family, dimerisation domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• protein binding (IEA) | GO:0005515
• nuclease activity (IEA) | GO:0004518
• ATP binding (IEA) | GO:0005524
• zinc ion binding (IEA) | GO:0008270

Biological Process

• DNA repair (IEA) | GO:0006281
• response to stress (IEA) | GO:0006950
• ubiquitin-dependent protein catabolic process (IEA) | GO:0006511

Domains

• ( pfam01466 ) Skp1 family, dimerisation domain
• ( pfam03931 ) Skp1 family, tetramerisation domain
• ( pfam10075 ) COP9 signalosome, subunit CSN8
• ( pfam00651 ) BTB/POZ domain
• ( pfam04119 ) Heat shock protein 9/12
• ( pfam04423 ) Rad50 zinc hook motif

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00426320	2.9995979253168707e-35	Skp1 family, dimerisation doma in containing p...
SGD	YDR328C	9.000561397357242e-21	SKP1 SGDID:S000002736, Chr IV from 1126018-1125434, Gen...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig18346.0.g90(coding)
ATGGAGAGCAACATTAACCAAATGCAACAAAACGTTCAGTAGGTTGAGGATAACAGGCTA
GTACAGCTTTAAACTATTGAAGGTACTATTACTGAAGTCCCAGTCTCTATAATTCAGCAT
TCTATTTTGATTAAGGGTATGATCGATGATGCAGATGTTGAAGAGGAAATTCCTTTGCCA
GATATCTAAAAGAAAACTTTGGACTAAATCATCGAATTTCTAACTCACCTGAAAGATAAC
GCAGCTCCTGACATCGAGAAGCCTCTTAGATCAAATAATTTCGAAGATGCAACTACTCCA
TGGTATGCAAACTTCATGAACAAAGACGATGACACTATCCAAGACTTGATTTTAGCAGCA
AACTACATGGATATCAAGCAACTTCTGGACTTAGGATGTGCAAAGATGGGCTGCATAATT
AGATCTCTCGATATTAAGCAGTTCAGATAGAGGTTCAACATCGTTAATGATTTTACACCT
GAGGAGGAGGCAGAGCCATTTGATGAAGATAAAATTGCTGAGTTAGCTGAATAATACCAG
AATGAGTTAAGATAGAAATAGGAGCAATAAAATGGTAATAATGATGGTTAATTGGTTTAA
TGA

>Contig18346.0.g90(protein)
MESNINQMQQNVQQVEDNRLVQLQTIEGTITEVPVSIIQHSILIKGMIDDADVEEEIPLP
DIQKKTLDQIIEFLTHLKDNAAPDIEKPLRSNNFEDATTPWYANFMNKDDDTIQDLILAA
NYMDIKQLLDLGCAKMGCIIRSLDIKQFRQRFNIVNDFTPEEEAEPFDEDKIAELAEQYQ
NELRQKQEQQNGNNDGQLVQ