Identifiers and Description

Gene Model Identifier

Contig13363.0.g11

Standard Name

RVB1b

Aliases

Contig13363_0_g11

Description

TIP49 C-terminus

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• hydrolase activity (IEA) | GO:0016787
• DNA helicase activity (IEA) | GO:0003678
• kinase activity (IEA) | GO:0016301
• ATPase activity (IEA) | GO:0016887
• transcription factor binding (IEA) | GO:0008134
• four-way junction helicase activity (IEA) | GO:0009378
• DNA binding (IEA) | GO:0003677
• magnesium chelatase activity (IEA) | GO:0016851
• ATP binding (IEA) | GO:0005524

Biological Process

• photosynthesis (IEA) | GO:0015979
• chlorophyll biosynthetic process (IEA) | GO:0015995
• viral genome replication (IEA) | GO:0019079
• regulation of transcription, DNA-templated (IEA) | GO:0006355
• DNA repair (IEA) | GO:0006281
• DNA recombination (IEA) | GO:0006310

Domains

• ( pfam06068 ) TIP49 C-terminus
• ( pfam00004 ) ATPase family associated with various cellular activities (AAA)
• ( pfam05496 ) Holliday junction DNA helicase ruvB N-terminus
• ( pfam13401 ) AAA domain
• ( pfam07728 ) AAA domain (dynein-related subfamily)
• ( pfam01078 ) Magnesium chelatase, subunit ChlI
• ( pfam13245 ) Part of AAA domain
• ( pfam13191 ) AAA ATPase domain
• ( pfam01695 ) IstB-like ATP binding protein
• ( pfam13671 ) AAA domain
• ( pfam13481 ) AAA domain
• ( pfam00158 ) Sigma-54 interaction domain
• ( pfam13173 ) AAA domain
• ( pfam02562 ) PhoH-like protein
• ( pfam13521 ) AAA domain
• ( pfam06414 ) Zeta toxin
• ( pfam13207 ) AAA domain
• ( pfam04851 ) Type III restriction enzyme, res subunit
• ( pfam13086 ) AAA domain
• ( pfam05075 ) Protein of unknown function (DUF684)
• ( pfam01057 ) Parvovirus non-structural protein NS1

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00476820	9.997093137033517e-262	TIP49 C-terminus family protei n
SGD	YDR190C	9.997093137033517e-262	RVB1 SGDID:S000002598, Chr IV from 841995-840604, Genom...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig13363.0.g11(coding)
ATGAAAATTGAAGAAGTTAAATCTACCACTAAAACTCAGAGAATCGCCTCACATACACAT
ATTAAGGGTCTTGGACTCGCTGAAGATGGGACCCCAATTGAAATTTCACATGGTCTCTGT
GGATAAGAAAAGGCAAGAGAAGCTTGCGGTATTGTCGTAGACATGATTAGATCAAAGAAG
ATGGCAGGTAAGGCTCTTTTAATGGTTGGACCCCCAGGCACTGGTAAAACTGCTATGGCA
TTGGCTATCGCTGCTGAGCTTGGTCCAAAGGTTCCATTCTGCCCCATGGTTGGATCAGAG
GTGTACAGTTCAGAAGTTAAAAAAACCGAAATTCTTATGGAAAATTTCAGAAGAGCTATT
GGACTTAGAATTAAGGAAACCAAGGAGGTATGGGAAGGTGAAGTAACTGAGATTTCCCCA
GAGGAAGTTGAGGATCCTCATGGAGGCTATGGAAAAGTAGTTAGTTCAGTTATTGTAAGT
TTAAAGACTACTAAGGGACAAAAGCAGCTTAAGTTGGATCCTAGTATATACGAGAATATC
TAAAAGGAGAAAGTTGCAGTTGGTGATGTTATCTATATTGAAGCAACTAGCGGAGCTGTC
AAGAGAGTTGGTAGATCAGACGCTTATGCAACTGAATACGATCTTGAAGCTGAAGAATAT
GTTCCAATCCCAAAGGGTGATGTACACAAAAAGAAGGAAATCGTATAAGATGTTACTCTT
CATGATCTTGATGTTGCAAATGCAAGACCCCAAGGTGGACACGATTTCTTGTCTTTGATG
AGTTAAATTAACAGACCAAAGAAGACTGAAATTACAGAAAAGCTTCGACTTGAAATCAAC
AAGGTCGTTAACAAATATATTGATCACGGTATTGCTGAACTCGTTCCAGGAGTTCTCTTC
ATTGATGAGGTCCATATGCTTGATATCGAATGTTTCACTTATCTCAATAGAGCTTTGGAA
AGCAACCTTGCCCCAATTGTTATTTTGGCTACAAACAGAGGTCACTGTTAAATTAGAGGT
ATCGAAATGAAGGCACCACATGGTATTCCCGTCGATCTCTTAGATAGATTACTTATCATT
AGAACCCTACCCTACTCATTGAATGATATAGTACAAATCTTGGCTATCAGATGTGCTACA
GAGAGTATTGAAATTGAGGAAGAGGCTTTAGCTCATCTTGCCTCAATCGGTACAAGAACA
TCCTTGAGATTCGTTGTCTAACTTATTACTCCATCTTTCGTACTTGCGGGTACCTTAGGT
AAATCCAAGATCACTTTGGACGAAGTCAATGAAATCAGCACTCTTTTCTTCGATGGAAAA
TCATCAGCTAAGCTCCTTCAAGAACAAGCCAAGTACTATATTTCATGA

>Contig13363.0.g11(protein)
MKIEEVKSTTKTQRIASHTHIKGLGLAEDGTPIEISHGLCGQEKAREACGIVVDMIRSKK
MAGKALLMVGPPGTGKTAMALAIAAELGPKVPFCPMVGSEVYSSEVKKTEILMENFRRAI
GLRIKETKEVWEGEVTEISPEEVEDPHGGYGKVVSSVIVSLKTTKGQKQLKLDPSIYENI
QKEKVAVGDVIYIEATSGAVKRVGRSDAYATEYDLEAEEYVPIPKGDVHKKKEIVQDVTL
HDLDVANARPQGGHDFLSLMSQINRPKKTEITEKLRLEINKVVNKYIDHGIAELVPGVLF
IDEVHMLDIECFTYLNRALESNLAPIVILATNRGHCQIRGIEMKAPHGIPVDLLDRLLII
RTLPYSLNDIVQILAIRCATESIEIEEEALAHLASIGTRTSLRFVVQLITPSFVLAGTLG
KSKITLDEVNEISTLFFDGKSSAKLLQEQAKYYIS