Identifiers and Description

Gene Model Identifier

Contig5638.0.g54

Standard Name

ROK1c

Aliases

Contig5638_0_g54

Description

DEAD/DEAH box helicase

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Cellular Component

• membrane (IEA) | GO:0016020

Molecular Function

• DNA binding (IEA) | GO:0003677
• hydrolase activity (IEA) | GO:0016787
• nucleic acid binding (IEA) | GO:0003676
• helicase activity (IEA) | GO:0004386
• ATP-dependent helicase activity (IEA) | GO:0008026
• hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (IEA) | GO:0016818
• ATP binding (IEA) | GO:0005524

Biological Process

• nucleobase-containing compound metabolic process (IEA) | GO:0006139
• protein import (IEA) | GO:0017038

Domains

• ( pfam00270 ) DEAD/DEAH box helicase
• ( pfam00271 ) Helicase conserved C-terminal domain
• ( pfam04851 ) Type III restriction enzyme, res subunit
• ( pfam13307 ) Helicase C-terminal domain
• ( pfam13292 ) 1-deoxy-D-xylulose-5-phosphate synthase
• ( pfam07517 ) SecA DEAD-like domain
• ( pfam11642 ) Mite allergen Blo t 5
• ( pfam01935 ) Domain of unknown function DUF87
• ( pfam13401 ) AAA domain

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00700870	8.00224171858215e-126	Type III restriction enzyme, r es subunit fami...
SGD	YGL171W	6.002009875581486e-101	ROK1 SGDID:S000003139, Chr VII from 182390-184084, Geno...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig5638.0.g54(coding)
ATGAATACCTTCTAGTTATTAAAGAGTGGCACATCTTTCCGCAAAGATAAAATCGCTCCA
GTGGCCAAGTTATTTTAAAACAAGAAGCAATAAAATCAGAAAGCCAAAAAAGACAAGCTT
AAGTAATAGTAATTGTAATTAGCGAATGCCAATGAAATTATTGCTAAGTAAGAAATTTAA
GAAATAATTGACCCCAGAGATTACTTGAATTACGAATCAGACAAGGAACTCCCACAGATC
AAAGCTCAGCTTAAAGAGTTAAAGTAGCAATTAAAAACTACTTAAAAATAGAAAATACTG
GATAAAATTTAGGAAGAATATAAACACTTAATGAATAAAAAGAGGGAGGTGGAGAATGCT
CTCAGAAAGAAATACAGAATCAAAGTGGAGGGCGATAATGTACCAGAGTTGTTAGATAGT
TTCAGTAAACTCAAGGAAAAATGTGGGCTTAGTGAAAGCTTTATGCATAAGCTGAAGGAA
AACGGGTTCAAAAAACCCACCCCTGTGTAGATGCAAGCAATTCCAGTATTATTCAATAGA
CGTTCAGCAATAGTTTTGGCAGAAACTGGAAGTGGAAAATCACTTGCTTTTATTGCACCT
ATGCTACATTTATTGAAAAATGGAGATGGTCTCAAGGCTGTTGTAGTCTCACCCACTCGT
GAACTCACAATTTAGTTATACAAAGAATTCTTAATGTTCAGTTAGATTGGGAGTCACAGT
ACATCTCCTAGAGTTAGATTCCTTAGAAAGAGTCTCTTTCCAACAGATCAAGAGTCCTTT
AATTAACTAACTCAATCATGCGAGATTTTGATATCCACACCTTTGAAATTGGCTGAACTC
TGCCAACAATACAAATTGAATAATTTGGAATTTCTCGTCGTTGATGAAGCTGATAAGATG
TTTGAATTAGGATTCTTGGAGCAAGTAGATTAAATTCTTGAGTAATAAAATGAGCAATAT
AAAATCTGCAAGTTTTTATTCTCTGCCACCATGCAACCTGGCATTGAAGAGTTGGTAAGA
ACTATAATGGAAGACCCTATAAAGATCCAAATGGGCATCAAAAACGCTTCAAACTAGCTG
ATCGACCAGTAAATTTAATACGTGGGAGATGAGCAGGGTAAATTGCACACTTTGAGAGAA
TTACTGGCTGATGGCTTTGAACCTCCCATGCTTATATTTGTACAGTCCAAGCACAGAGCC
AAGGAACTTTATCATGAATTGATCTATGATGGATTGAATGTAAATGTTATACATGCTGAT
AAAAAGAAGCACGAAAGAGATGAAATAATAAAGCAATTCCGTCTGGGCAAAATCTGGGTG
CTGATCGCCACAGATCTTATGTCTCGTGGTATAGATTTCAAGGGTGTAAATACAGTAGTA
AACTATGATTTCCCACAGAGCATAGTCAGCTACATTCATAGAATAGGAAGAACAGGAAGA
GCTGGAAAAGCAGGCAAAGCAATTACTTATTTCACAGATGATGATGCTGAATTCCTCAGA
AATCTCGCCAATTTATTAAAGAAATCTGGACTTGATGTACCAGATTGGATGTTGACCATG
AAGCCAGCCACCAGCAAAAGATGGAAGGAAATTGAAAAGAAGCCAGTACACAGACGCACT
ATTTCAACAGACATTGAAAAGAACACAAACAAGCGCTTCCAGAAGTAGATTCTCAAGGAA
GGAAAGAAACTGGCCAAATTAGCTGAGAAATTCCCTCAAAACATCAATCCAGTAGATGAA
GATGGGGATGAAGATAATCTAACCCAGGGTTAAAAAGGCGTAAAAGGAGGCAATCAGATG
GATGATGAGGATGATGGAGAGGAAGTATGGGATGAAGATGAGAAACTGCAATCTGGTGAG
GAATTTGCCAGTGACGATGAGGATATCAACTCTGATGAATATTGA

>Contig5638.0.g54(protein)
MNTFQLLKSGTSFRKDKIAPVAKLFQNKKQQNQKAKKDKLKQQQLQLANANEIIAKQEIQ
EIIDPRDYLNYESDKELPQIKAQLKELKQQLKTTQKQKILDKIQEEYKHLMNKKREVENA
LRKKYRIKVEGDNVPELLDSFSKLKEKCGLSESFMHKLKENGFKKPTPVQMQAIPVLFNR
RSAIVLAETGSGKSLAFIAPMLHLLKNGDGLKAVVVSPTRELTIQLYKEFLMFSQIGSHS
TSPRVRFLRKSLFPTDQESFNQLTQSCEILISTPLKLAELCQQYKLNNLEFLVVDEADKM
FELGFLEQVDQILEQQNEQYKICKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQL
IDQQIQYVGDEQGKLHTLRELLADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD
KKKHERDEIIKQFRLGKIWVLIATDLMSRGIDFKGVNTVVNYDFPQSIVSYIHRIGRTGR
AGKAGKAITYFTDDDAEFLRNLANLLKKSGLDVPDWMLTMKPATSKRWKEIEKKPVHRRT
ISTDIEKNTNKRFQKQILKEGKKLAKLAEKFPQNINPVDEDGDEDNLTQGQKGVKGGNQM
DDEDDGEEVWDEDEKLQSGEEFASDDEDINSDEY