Identifiers and Description

Gene Model Identifier

Contig6080.0.g99

Standard Name

ROK1b

Aliases

Contig6080_0_g99

Description

DEAD/DEAH box helicase

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Cellular Component

• membrane (IEA) | GO:0016020

Molecular Function

• ATP-dependent helicase activity (IEA) | GO:0008026
• hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (IEA) | GO:0016818
• ATP binding (IEA) | GO:0005524
• DNA binding (IEA) | GO:0003677
• hydrolase activity (IEA) | GO:0016787
• nucleic acid binding (IEA) | GO:0003676
• helicase activity (IEA) | GO:0004386

Biological Process

• nucleobase-containing compound metabolic process (IEA) | GO:0006139
• protein import (IEA) | GO:0017038

Domains

• ( pfam00270 ) DEAD/DEAH box helicase
• ( pfam00271 ) Helicase conserved C-terminal domain
• ( pfam04851 ) Type III restriction enzyme, res subunit
• ( pfam13307 ) Helicase C-terminal domain
• ( pfam07517 ) SecA DEAD-like domain
• ( pfam13292 ) 1-deoxy-D-xylulose-5-phosphate synthase
• ( pfam01935 ) Domain of unknown function DUF87
• ( pfam13401 ) AAA domain

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00700870	5.998752501907352e-124	Type III restriction enzyme, r es subunit fami...
SGD	YGL171W	1.9998944264638884e-101	ROK1 SGDID:S000003139, Chr VII from 182390-184084, Geno...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig6080.0.g99(coding)
ATGCTTAATTTATAGTAAAACAAGAAGCAATAAAATCAGAAAGCCAAAAAAGACAAGCTT
AAGTAATAACAATAGTAATTAGCAAATACCAATGAAATTATTGCTACATAAGAAATTTAA
GAAACAATTGACCCCAGAGATTACTTGAATTACGAATCAGACAAGGAACTCCCACAGATC
AAAGCTCAGCTTAAAGAGTTAAAGTAGCAATTAAAAACTACTCAGAAATAGAAAATACTG
GATAAAATTTAGGAAGAATATAAACACTTAATGAATAAAAAGAGGGAGGTGGAGAATGCA
CTCAGAAAGAAATATAGAATCAAAGTGGAGGGCGATAATGTACCAGAGTTGTTAGATAGT
TTCAGTAAACTCAAGGAAAAATGTGGGCTTAGTGAAAGCTTTATGCATAAACTCAAGGAA
AACGGGTTCAAAAAGCCCACCCCTGTGTAGATGCAAGCAATTCCAGTATTATTCAATAGA
CGTTCAGCAATAGTTTTGGCAGAGACTGGAAGTGGAAAATCGCTTGCTTTTATTGCACCT
ATGCTACATTTATTGAAAAATGGAGATGGTCTCAAGGCTGTTGTAGTCTCACCCACTCGT
GAACTCACAATCTAGTTGTACAAAGAATTCTTAATGTTCAGTTAGATTGGGAGTCACAGT
ACATCTCCTAGAGTGAGATTCCTTAGAAAAAGTCTCTTCCCAACAGATCAAGAGTCTTTT
AATTAACTGACTTAATCATGCGAGATTTTGATATCCACACCATTGAAATTGGCTGAACTT
TGCCAACAATACAAATTAAATAATTTGGAATTTCTCGTCGTAGACGAAGCTGATAAGATG
TTTGAATTAGGATTCTTGGAGCAAGTAGATTAAATTCTGGAGTAATAAAATGAGCAATAT
AAAATCTGCAAGTTTTTATTTTCTGCCACCATGCAACCTGGTATTGAAGAGTTAGTTAGG
ACTATAATGGAAGACCCTATAAAGATCCAAATGGGCATTAAAAACGCTTCAAACTAGCTG
ATCGACCAGTAGATTTAATACGTGGGAGATGAGCAGGGCAAATTGCACACTTTGAGAGAA
TTACTGGCTGATGGCTTCGAACCTCCCATGCTTATATTTGTATAGTCCAAGCACAGAGCC
AAGGAACTTTATCATGAATTGATCTATGATGGATTGAATGTAAATGTTATACATGCTGAT
AAAAAGAAGCACGAAAGAGATGAAATAATAAAGCAATTCCGTCTGGGCAAAATCTGGGTG
TTGATAGCCACAGATCTGATGTCTCGTGGTATAGATTTCAAGGGTGTAAATACAGTAGTA
AACTATGATTTCCCACAGAGCATAGTCAGCTACATTCACAGAATTGGAAGAACAGGAAGA
GCTGGAAAGGCAGGCAAAGCAATTACTTATTTCACAGATGATGATGCTGAATTCCTCAGA
AATCTCGCCAATTTATTAAAGAAATCTGGACTTGATGTGCCAGATTGGATGTTGACCATG
AAGCCAGCCACCAGCAAAAGATGGAAGGAAATTGAAAAGAAGCCAGTGCACAGACGCACT
ATTTCAACAGACATTGAAAAGAACACTAAACAACGCTTCCAGAAGTAGATCCTCAAGGAA
GGAAAGAAACTGGCCAAATTAGCTGAGAAATTCCCTCAAAACATCAATCCAGTAGATGAA
GATGGGGATGAAGATAATCTAACCCAGGGTTAAAAAGGCGTAAAAGGAGGCAATCAGATG
GATGATGAGGATGATGGAGAGGAAGTATGGGATGAAGATGAGAAACTGCAATCTGGTGAG
GAATTTGCCAGTGACGATGAGGATATCAACTCTGATGAATATTGA

>Contig6080.0.g99(protein)
MLNLQQNKKQQNQKAKKDKLKQQQQQLANTNEIIATQEIQETIDPRDYLNYESDKELPQI
KAQLKELKQQLKTTQKQKILDKIQEEYKHLMNKKREVENALRKKYRIKVEGDNVPELLDS
FSKLKEKCGLSESFMHKLKENGFKKPTPVQMQAIPVLFNRRSAIVLAETGSGKSLAFIAP
MLHLLKNGDGLKAVVVSPTRELTIQLYKEFLMFSQIGSHSTSPRVRFLRKSLFPTDQESF
NQLTQSCEILISTPLKLAELCQQYKLNNLEFLVVDEADKMFELGFLEQVDQILEQQNEQY
KICKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQLIDQQIQYVGDEQGKLHTLRE
LLADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHADKKKHERDEIIKQFRLGKIWV
LIATDLMSRGIDFKGVNTVVNYDFPQSIVSYIHRIGRTGRAGKAGKAITYFTDDDAEFLR
NLANLLKKSGLDVPDWMLTMKPATSKRWKEIEKKPVHRRTISTDIEKNTKQRFQKQILKE
GKKLAKLAEKFPQNINPVDEDGDEDNLTQGQKGVKGGNQMDDEDDGEEVWDEDEKLQSGE
EFASDDEDINSDEY