Identifiers and Description
Gene Model Identifier
Contig2682.0.g45Standard Name
RFC1aAliases
Contig2682_0_g45Description
Replication factor RFC1 C terminal domainGenome Browser
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Genome Browser (Micronucleus)
Micronuclear Genome Browser
Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
- DNA replication factor C complex (IEA) | GO:0005663
- integral component of membrane (IEA) | GO:0016021
Molecular Function
- ATP binding (IEA) | GO:0005524
- DNA clamp loader activity (IEA) | GO:0003689
- ATPase activity (IEA) | GO:0016887
- four-way junction helicase activity (IEA) | GO:0009378
- transmembrane transporter activity (IEA) | GO:0022857
Biological Process
- DNA replication (IEA) | GO:0006260
- DNA repair (IEA) | GO:0006281
- transmembrane transport (IEA) | GO:0055085
- DNA recombination (IEA) | GO:0006310
Domains
- ( pfam08519 ) Replication factor RFC1 C terminal domain
- ( pfam00004 ) ATPase family associated with various cellular activities (AAA)
- ( pfam00533 ) BRCA1 C Terminus (BRCT) domain
- ( pfam05496 ) Holliday junction DNA helicase ruvB N-terminus
- ( pfam13207 ) AAA domain
- ( pfam13401 ) AAA domain
- ( pfam13191 ) AAA ATPase domain
- ( pfam07728 ) AAA domain (dynein-related subfamily)
- ( pfam13238 ) AAA domain
- ( pfam00083 ) Sugar (and other) transporter
Gene Expression Profile
No expression data available at this time.
Homologs
Source Identifier Score Description T. thermophila TTHERM_00939110 9.997217559668329e-127 BRCA1 C Terminus (BRCT) domain
SGD YOR217W 2.0001503375893664e-79 RFC1 SGDID:S000005743, Chr XV
from 749301-751886, Genom...
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>Contig2682.0.g45(coding)
ATGATCCGCGATTTCTTTAAACAAACATCAATCAAGACCTCCGATTCAAAGGGGAAAGTA
GTCCAACCTTCTCCCGTCGCATCAAAAACACAAACAAAGAGCAAAGAACCCAACACAAGA
TTTGAGAGAAGCGAGAAACGTGAAAAATCTAAGTCTAAGCAGTCCCAGGCTACAGAAGAT
AAGAGTTCTTAATAAAATTAGAAGTCTGCTAAAAAAGAGCTCATCAAGTCAACAAATTCA
AGGAGCAAGGTTCAATCTCCCGCAAAATCTCCAATGACTCGCACTCCCATTAAAAGTTAA
CCAAAAAAAGAGTAACAAACCTACGAAGACTCATTGGAAGACGCAGAGGAGGAAGAAGTG
AAAGTTAGTACTAGATCTGCCGCCAAAAATCAAACTTTAGCTCAAAACTCAAAAGCTTAA
AAATCTCATGGAGATAAAAATACAGGTAATTCTTAGAGATCTTCCCACAAAAATGAGTCA
AACAATAGAAACGATTCTCAATCAAGAAGCAAGACCCCTATTAAGAATTAATAGCAATCA
AACATGCAAGTACCTGAGAATAAAGTAAATACTAGAAATAGTGCTAAAGCTACTCCAAAT
AAAAACTAAATTCAGTCCTAAGCAAACAATATGATTCAAAAGACCAAGCATGCTCCCCCT
TCCCCAGCTAAGAATTCCCAAAAATCTCAAAATGTTGTAAATTAGAACACTCAGCAAAAG
TCAAAGCAGCCCCAAGATACTTTCGCAGACGTGGAGATGAAAGATGAGGATGATAATTAA
GAAACTATCTCACCTTAAATTCGTTCCTCACAAAGAAATACCAGACAAAGTTAATCGAGA
GGAGCTTCTTAAAACACAAATATTCGCAGTGGTTAAAGCTAAAATGCTCAGAATGTTGCC
AATTAAAATAATCATAAATCAGATGTTGTAATGAAGTAGTAAGTTAGCGAGGATGAGGAC
GAAGATTTAGGAGCTATGATGAGAAATAGAAGAAGAGGACCTGCTGCTGTAGTTGAGGAT
GAAGATGACGATCAGGAAACTTAAATCCAAGCAAGAAACAGGCAATCGAAGAAAAGGAAC
ACAATTCTTGACGATGAAGATGAAGAGGATGTTAGAAGAACTCAGACAAATAAAAGATAA
AAAGTTACTGAAAATGAAGAGGAAGAGAAAGATGAGAAATAGCAACAGTAATCTAAATAG
AGCTAAGCTGATTTGTATTTAGAAAAGATGGCTTATTCAAAGTCATAATAGCAGCTCTCT
CAATCATCAGCTAAACAAAGTAAAAATATGCAAGCATCAGGAATGAGCCCTAGATTGGAT
AAACTTAGCATTAATGATTCTAACGCAGCTAAAAGTGGCAGCAGATAAATGCCTCAAACT
ATGAGTTAAAAGTCCAATGGCAATGCTAGAAAGTAGCAAAAACCTGCTAGTCAAGATGAA
GACATGGACTTGGATCTTGATGATTTAAGAGATGCAATTGAGGACAAGCCCTTGGAAGGT
TTAACTTTTGTGATATCAGGTGAATTCCAGATCATCTCCAGAGGGCGTTTGGAATCACTG
CTCATTGAAAAAGGAGGGAGAGTGACATCAGCTGTGTCAGGCAAGACTGATTACTTAATA
GTGGGTTATAAATTAGAGGATGGCAGAGAAGTGTCTCAGGGCAGTAAATTCGTGAAAGCA
ACTTAACTAGGAAAGACCATCCTTACTGAAAGTCAACTAGAGGAGTTTATTAAGGAGAAA
TCAGGGGATCAGAGTTTCACTATTTCCATGAGACCTGGACTTTCAATAGCTGCAAGTGCT
GATGCCAAAATGACTGATGAACAGGCGCTTAAAGCATCAGTTGAGAAGAAGAGAGAAAGT
TTGGCTCAGGATAATTAATCTATGGTTGGTAAGGAAATGTGGACTGATCTATATGCTCCT
CAATCAGTGAGAGACTTAGTTGGAAACCAAGGTGTAATTGATCAGCTATACGAATGGCTC
AAAGATTGGGATGATGTCCATGTCAGAGGAAACAAAAAGCAAGTTCATCCACGCAGAGGC
CAAAGTTGGTAAGATTTGCCAAAAGTCAATGCCACTGCAGTTCTTCTGAGTGGACCACCA
GGCATTGGAAAAACAAGCAGTGCTAGGATTGTGTGCAAACAACTTGGGTTTGAAGTGCTT
GAGACAAATGCCAGTGATACAAGAAACAAGAATTCAATTAACAACATGCTACAAGTTCTG
TCATCAAATAAATCAATAGATTACTTCAGCGTTGCAGGTATAAAGAAGCAGTAAGCCAAC
CCAGTTTCGTCAGACTCAGCTGGCTAGCAAACCAAGAAATCAGTCATTATCATGGATGAA
GTAGATGGAGTAGGTGCTGGTGACAGGGGTGGTCTGTAAGCATTAATTCAAGTGATTAAG
TTAACAAAGACTCCAATTATCTGTATATGCAACGATAGGTAAAACCGCAAGTTGCAAAGT
TTGCTAAATTACTGCTATGACTTGAAGTTCAACAGACCAAGCTAAAATGAGATAGCAAAG
AGAGTTTAGTTGATATGCCAATCAGAAGGTCTTTAAATTGACAATAATACCATTAATAAG
ATTATAGAAAGTTCAGGCTCTGACATCAGACAAATTGTTAATATTTTGCAGATGTGGAAA
AATTAGCAACTTGACACAGGTTTCTTAAAGAACATTTCTAAAGACGAAAATGTAATGATC
AATAACTTTGATGCTGCACATCGCATGCTAAATCATGGAGCTTAGAGTTTAGACATTAAA
TATCCTTAATTTAGGTAGAAAATGGACTTGTTCTTTATTGACTATGATTTGATTCCACTT
TTGATTCAAGAAAATTACTTAAACTCTATGGGAGATAGAAATAAACTTGAGGATATAGAA
CGTATGGCTTCTGCTGCTGAGTTTATTTCGCTTGGTGATAGTATCTCAAACTAAGTTCGC
AAGAATTAGGATTGGTCACTTCTACCTAATATGGGTATTTGCTCTGCTATAGCTCCATGT
TTACTCGTGAATGGTTCAACATTTTATCCTAGATTCCCTGAATGGTTGGGTAAAAATTCT
TCTCAACGCAAAGCCAAGCGTTTAATTCGTGAATTGAAGAAAGTCATGGGTCATCATGCT
CAGGCTGATAGAATGGAAATTTAGAATGAGTACACACAACTTATTCTTTCTTACTTGTAC
AAGTTCCTTAAGAAGCATGAGAAAACTGGGGATAAGGAAAATCTACACGAGTTACTAGAA
TTTATGAAAGATTTGGGACTCACTATGGAACATTTTAAGGAACATTTGATTTCTCTATGT
ATGGATAAGAAAACTTGTGAAGGATTTGATAGTCTAGCTTCCACTACTAAAGCAGCTTTT
ACAAAGATGTTTAATCAGGAAAATAAAGATAATCTAGTTGGCAAAAAAGGAAAGAAAGCT
CCAGCTGGTAAAAAAGGTGGTGCTTCACCTGCTGCCACAGCTGCCGATGACAACGGTGAG
GCTTCTGATGTAGAAGAGGAAGCAGAAGAAGAAGTTGGACAACTCATAGATGAAGATCAG
GCTCTAGAACTTAAAAAGGGCAAACAACTAGAGAAAGAAATGGAAAAGAAGAATAAAAAG
GCAAAAGTAGAGAAGTTTGAATTAGTTCAAATCAAAGGAGGAGCTCCAGCTGGTGGTAAA
GCAAAGAAGGGTGCTAAGAAAGGGGCAAAAACCACTGCAAAAGCTGCTGGCAAGAAAGGC
AAGAAGGGAGCAGCCAAAGATGATAGAAGTGAGGAAGAGTACATCAGCGATGATAGTCTC
AATGAGTTTGTTGTCGATGATGATGAAATTGAGTATGACAAAAAGGGTAAAAAGGGTGGT
GCTAAGAGTGCTGGGGCCAGAGGTAGAGGCAAAAAATGA>Contig2682.0.g45(protein)
MIRDFFKQTSIKTSDSKGKVVQPSPVASKTQTKSKEPNTRFERSEKREKSKSKQSQATED
KSSQQNQKSAKKELIKSTNSRSKVQSPAKSPMTRTPIKSQPKKEQQTYEDSLEDAEEEEV
KVSTRSAAKNQTLAQNSKAQKSHGDKNTGNSQRSSHKNESNNRNDSQSRSKTPIKNQQQS
NMQVPENKVNTRNSAKATPNKNQIQSQANNMIQKTKHAPPSPAKNSQKSQNVVNQNTQQK
SKQPQDTFADVEMKDEDDNQETISPQIRSSQRNTRQSQSRGASQNTNIRSGQSQNAQNVA
NQNNHKSDVVMKQQVSEDEDEDLGAMMRNRRRGPAAVVEDEDDDQETQIQARNRQSKKRN
TILDDEDEEDVRRTQTNKRQKVTENEEEEKDEKQQQQSKQSQADLYLEKMAYSKSQQQLS
QSSAKQSKNMQASGMSPRLDKLSINDSNAAKSGSRQMPQTMSQKSNGNARKQQKPASQDE
DMDLDLDDLRDAIEDKPLEGLTFVISGEFQIISRGRLESLLIEKGGRVTSAVSGKTDYLI
VGYKLEDGREVSQGSKFVKATQLGKTILTESQLEEFIKEKSGDQSFTISMRPGLSIAASA
DAKMTDEQALKASVEKKRESLAQDNQSMVGKEMWTDLYAPQSVRDLVGNQGVIDQLYEWL
KDWDDVHVRGNKKQVHPRRGQSWQDLPKVNATAVLLSGPPGIGKTSSARIVCKQLGFEVL
ETNASDTRNKNSINNMLQVLSSNKSIDYFSVAGIKKQQANPVSSDSAGQQTKKSVIIMDE
VDGVGAGDRGGLQALIQVIKLTKTPIICICNDRQNRKLQSLLNYCYDLKFNRPSQNEIAK
RVQLICQSEGLQIDNNTINKIIESSGSDIRQIVNILQMWKNQQLDTGFLKNISKDENVMI
NNFDAAHRMLNHGAQSLDIKYPQFRQKMDLFFIDYDLIPLLIQENYLNSMGDRNKLEDIE
RMASAAEFISLGDSISNQVRKNQDWSLLPNMGICSAIAPCLLVNGSTFYPRFPEWLGKNS
SQRKAKRLIRELKKVMGHHAQADRMEIQNEYTQLILSYLYKFLKKHEKTGDKENLHELLE
FMKDLGLTMEHFKEHLISLCMDKKTCEGFDSLASTTKAAFTKMFNQENKDNLVGKKGKKA
PAGKKGGASPAATAADDNGEASDVEEEAEEEVGQLIDEDQALELKKGKQLEKEMEKKNKK
AKVEKFELVQIKGGAPAGGKAKKGAKKGAKTTAKAAGKKGKKGAAKDDRSEEEYISDDSL
NEFVVDDDEIEYDKKGKKGGAKSAGARGRGKK