Identifiers and Description

Gene Model Identifier

Contig2863.0.g30

Standard Name

POLR1B

Aliases

Contig2863_0_g30

Description

RNA polymerase Rpb2, domain 6

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• DNA binding (IEA) | GO:0003677
• DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899

Biological Process

• transcription, DNA-templated (IEA) | GO:0006351

Domains

• ( pfam00562 ) RNA polymerase Rpb2, domain 6
• ( pfam04563 ) RNA polymerase beta subunit
• ( pfam04560 ) RNA polymerase Rpb2, domain 7
• ( pfam04565 ) RNA polymerase Rpb2, domain 3
• ( pfam04561 ) RNA polymerase Rpb2, domain 2
• ( pfam06883 ) RNA polymerase I, Rpa2 specific domain
• ( pfam04567 ) RNA polymerase Rpb2, domain 5

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_01075780	9.997093137033517e-262	DNA-directed RNA polymerase, b eta subunit fam...
SGD	YPR010C	9.997093137033517e-262	RPA135 SGDID:S000006214, Chr X VI from 581196-577585, Ge...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig2863.0.g30(coding)
ATGTCTAAAGAGAGAAAGGTAAACGATAGAGTTAGATTCACAGAGAAAACTCTTAGTGTA
CAACTTAAAAATGCAGCTAAGCATCATATTGAGTCATTCGAGTATGCCATTGAGCAGTGC
TTACCAAGGATTTGTCAAAATTTACTAGCTGCTGAGTTAAGTGCTCCAACTGAAGCAGAG
ATCGCAAGAAACCCAAGTGCTAACAAAATTTAATACCCATTTAAGAAGATGCTTATATGG
TTTGAGAATTTCCAATTGAGAAAGCCAATTAGATAAGATCAATCGACAGGCCTCATCAGT
CTATCTCAGAGTTCTTAAGCAGCAGCAGGAGGAGATGGAGATAAAATCTACCCAAGTGAA
TGCAGAATTAGATCTCTCACATATTCAGCACCTCTTTATGCTACCATTGCTAGAAAGATT
GATAATGAGCCTGAAGAAAAGGTCACTGTGCCACTTGGTGATATCCCAGTTATGATTAGA
TCATCTAACTGTCATTTGTATGGATTGACTGAGGAGGAATTAGTTAAAAAGCACGAGGAT
ATGGCTGAGTTCGGAGGCTATTTCATTATTAATGGAAATGAGAGAATCGTTAGAATGCTT
ATTATGACAAAAAGAAACTACCCAGTTGCATTTTCTAGACCAACCTTCATTAACAGAGGC
AAGCTCTTCACACCTTTTGCTGTTTAAATGAGATGTGTGAGAGATGACTTATTTGCATAG
ACTCTCACTCTTCATTATCTTAGCGATGGTAATTGCTCAATGAGGCTTATATACTAAAAG
CAAGAATTTTTAATTCCAGCTTATGTCATTCTTAAGGCTTTAGCAGATGTTACAGATGCA
TAAATTTATAATAAGCTTGTCAAAGGTTACTTCAAAAATAGATAAATAGGAGATAGAGTT
GAAGTTTTGCTTCAAGATGGTAATAAGTTGTGCTTATACTCATAAAACTAATGTTTAGCC
TATCTTGGTTCAAGATTTAGAATGGCTTTAATCGGTGTTCAATCAGATATGAGTGACATA
GATGTTGGTAACTTTTTTATCTAAAGACATCTATTTGTTCAAACTAATAATTACAAAGAT
AAGTTCAATACTCTCTGCATAATGATTGAGAAGTTATATGCAGTTGTGGCCTAAGAGTGT
GAACTAGATAATCTCGATTCACCATCTAACTAAGAAGTTCTTTTGAGTGGTCATTTATAT
GCCTCCCTATTAGCTGAAAAACTTCAGGATTTATTGATTGGAGCTAAAGCTAAGATAATC
AGAGATCTGAGAAATCCCAATTTTGACAGACAATAAATTAGAAACCCAATTTATATGAAA
AAAATGATAGACACCCAAGTATCAGTAGGAAAGAAAATGGAACACTTCTTAGCTACAGGG
AATCTGATATCAAGAACTAATTTAGATTTAATATCAATCCATAGAGGATAATATTTCGCA
GAGATGAAAACCACAACTGTCAGAAAGTTGCTTCCAGAAGCTTGGGGATTCCTTTGCCCA
GTACATACTCCAGATGGTGGTCCCTGCGGTCTTTTAAACCATATTACTTCATCTTGTATT
CCACTTGCCAAAGAAGATGGCTTACTTTGCAGACAAGGTGAAGCTTTGAAGAACTTTAAG
AGTCTACTAGCCTAATTGGGAATGAATCCTATATCAAGTGATTTTGGACTTATTTATCCT
TACAAGTTTTTACCTATTCTTCTCGATGGTGTATTATTGGGATATGTAGATCCAGAAGTT
GCTCCTCAGCTTGTTAAATCGTTAAGAGCTCTTAAAATTTAACAAAGTAATACCAACCAA
TTTTATGAAAGTGTACCAAAAACTCTTGAAGTATCTTACTTAGCCCCAACTTTCCCACCA
GAAGAAGCTAGTGATAATCCCGAGACATAAGGCCAAACTAACAAAAGAGGAACAAAGAAT
AAGTTCTTCCCTGGTATTTTCTTAGCATCATCTGTATCTAGATTTGTAAGACCAGTCTAA
AATTTAGAAGTTGGTGGAGTAGAATGGATTGGACCTTTAGAACAAGTTAATCTTTCTATA
GCTTGCCTTGAGGAGGATATTAGAAGCGACACTACACATTAAGAGATAGACCCAATAAAT
GTTTTGAGTATGATTGCCTCAACAATTCCTTTTGCAGATTATAACCAATCTCCAAGAAAC
ATGTATCAGTGTCAAATGGCAAAATAAACTATGGGAACTCCTTATCACAATCATCCTTAT
AGAATGGATAACAAAGTATATAGAATCCTCTTCCCTCAAGAACCTTTAGTGAGAACTGAG
AACTATAACAATTACGATTTTAGACAATATCCAAGTGGAACCAATGCAGTCGTTGCAGTT
ATCTCATATACAGGTTACGATATGGAAGATGCTATGATCATAAACAAGAGTGCTTACGAA
AGAGGTTTTGGTCATGGATGTGTCTACAAATCTTACATCAAAGAAGTTAATGAGTAAGTG
ATGGGTGCTTCTTCAAGCAAACAAAGATACAGGATGCTCAACTAGAACAAGTACAGAGAG
GACTAAAAGATTGATCTAAAAGAGAAAAACCTTGACACTGATGGAATTCCAAGCATTGGA
CATCAGCTCACTCATGGAAGCCCAGAGCTATGCACATATGACACTGTTTTGGGAAAGCCT
AAATATGTGAGTTTCAAAGATAATGAACCAGCTAGAGTTGAAAACGTAAGATTAATGGGA
GATGAAAAAGGCTCAGCAAATAACGTAAACATTGGCTATACTATAAGATACGAAAGAAAC
CCAGTTATTGGAGATAAGTTTAGTAGTCGTCACGGTCAAAAGGGTGTGCTCTCAGTTCTT
TGGCCCTAAGAAGACATGCCTTTTACTGAGAGTGGAATCTCTCCAGATATTATCATTAAT
CCTCATGCATTCCCATCAAGAATGACCATTGGAATGTTGGTAGAATCAATTGCTGGTAAG
TCTGGTTCTAACACAGGAGAGTTCAAATAAGTAAAGACATTTGAGAAATACGAGGATGAT
GATGTGGTCTAGTACTTTGGTCAGGAACTCCTAAAGCAAGGGTATAATTATTATGGAACT
GAGACAATGTACTCTGGAATCTTTGGAGATCAAATGAAGGTTGATATCTTCATTGGTGTT
GTCTATTATCAACGCCTCAGACATATGGTTTCAGATAAGTCTTAAGCTAGAGCCACAGGT
CCTTATGATGTCTTAACTCATCAACCAGTGAAGGGAAGAAAGAAGCAAGGAGGTATTAGA
TTTGGAGAGATGGAAAGAGACTCACTTTTAGCTCATGGAGCAGCTTTCTGCTTGAATGAT
AGACTTCTAAAATGTTCCGATTATAGTGAGGGATATGTCTGCAAAAAGTGTGGAAGCATC
ATTAGTTGCCACTTAAATAGAGAAATTCTAAAAACCTAGAACAATATATCAGCAGACATG
AAATACGTTGTCAATGAAAAGGTATACTGTAGAGTTTGTGATGAATACGATTGCAGAAAA
GTTCAACTTCCATATGTCCTCAGATATTTAACTAATGAATTAGCTGCTATGAATATTAAA
CTTGCTTTCCATTTAGAGCCAGCTGTTTGA

>Contig2863.0.g30(protein)
MSKERKVNDRVRFTEKTLSVQLKNAAKHHIESFEYAIEQCLPRICQNLLAAELSAPTEAE
IARNPSANKIQYPFKKMLIWFENFQLRKPIRQDQSTGLISLSQSSQAAAGGDGDKIYPSE
CRIRSLTYSAPLYATIARKIDNEPEEKVTVPLGDIPVMIRSSNCHLYGLTEEELVKKHED
MAEFGGYFIINGNERIVRMLIMTKRNYPVAFSRPTFINRGKLFTPFAVQMRCVRDDLFAQ
TLTLHYLSDGNCSMRLIYQKQEFLIPAYVILKALADVTDAQIYNKLVKGYFKNRQIGDRV
EVLLQDGNKLCLYSQNQCLAYLGSRFRMALIGVQSDMSDIDVGNFFIQRHLFVQTNNYKD
KFNTLCIMIEKLYAVVAQECELDNLDSPSNQEVLLSGHLYASLLAEKLQDLLIGAKAKII
RDLRNPNFDRQQIRNPIYMKKMIDTQVSVGKKMEHFLATGNLISRTNLDLISIHRGQYFA
EMKTTTVRKLLPEAWGFLCPVHTPDGGPCGLLNHITSSCIPLAKEDGLLCRQGEALKNFK
SLLAQLGMNPISSDFGLIYPYKFLPILLDGVLLGYVDPEVAPQLVKSLRALKIQQSNTNQ
FYESVPKTLEVSYLAPTFPPEEASDNPETQGQTNKRGTKNKFFPGIFLASSVSRFVRPVQ
NLEVGGVEWIGPLEQVNLSIACLEEDIRSDTTHQEIDPINVLSMIASTIPFADYNQSPRN
MYQCQMAKQTMGTPYHNHPYRMDNKVYRILFPQEPLVRTENYNNYDFRQYPSGTNAVVAV
ISYTGYDMEDAMIINKSAYERGFGHGCVYKSYIKEVNEQVMGASSSKQRYRMLNQNKYRE
DQKIDLKEKNLDTDGIPSIGHQLTHGSPELCTYDTVLGKPKYVSFKDNEPARVENVRLMG
DEKGSANNVNIGYTIRYERNPVIGDKFSSRHGQKGVLSVLWPQEDMPFTESGISPDIIIN
PHAFPSRMTIGMLVESIAGKSGSNTGEFKQVKTFEKYEDDDVVQYFGQELLKQGYNYYGT
ETMYSGIFGDQMKVDIFIGVVYYQRLRHMVSDKSQARATGPYDVLTHQPVKGRKKQGGIR
FGEMERDSLLAHGAAFCLNDRLLKCSDYSEGYVCKKCGSIISCHLNREILKTQNNISADM
KYVVNEKVYCRVCDEYDCRKVQLPYVLRYLTNELAAMNIKLAFHLEPAV