Identifiers and Description

Gene Model Identifier

Contig17704.0.g32

Standard Name

POLR1A

Aliases

Contig17704_0_g32

Description

RNA polymerase Rpb1, domain 5

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• DNA binding (IEA) | GO:0003677
• DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899

Biological Process

• transcription, DNA-templated (IEA) | GO:0006351

Domains

• ( pfam04998 ) RNA polymerase Rpb1, domain 5
• ( pfam00623 ) RNA polymerase Rpb1, domain 2
• ( pfam04983 ) RNA polymerase Rpb1, domain 3
• ( pfam05000 ) RNA polymerase Rpb1, domain 4
• ( pfam04997 ) RNA polymerase Rpb1, domain 1

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00047550	9.997093137033517e-262	RNA polymerase Rpb1, domain 2 family protein
SGD	YOR341W	9.997093137033517e-262	RPA190 SGDID:S000005868, Chr X V from 960987-965981, Gen...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig17704.0.g32(coding)
ATGTTTAAGCTAGACAACGAATTGATAAAGGACCGATTTGCTGCAACCTCTTTCAGTTTT
TACACTGAGCAAGAGATTGAGAAATTGGCTGTGAAACAAATTCTTAATCCTACTGCTTTT
GATCATTTGAATAATCCCACAAATGGAGGTATTTATGATAAGGCTTTAGGAGTCTCACCA
TTCGATCATCGTGCATAGTGCGTCACTTGTGGACTTGACTGCTAGTACTGCCCAGGTCAT
TTAGGCTATATTGAATTAACTGCACCCTGCTATAACCCATTCTTGATCAACCAGCTTTAC
AAGCTATTAAAGTCTAAATGTATCAAATGCCACAGAATAAGAATACATCCAAAGAAAATA
GACATCTACATTCAATGTCTGCAACTTATAAAATCAGGACAAATTGTAGGCTCTCAAGTA
TTAAAGAACTACTTCTTAAATGCAGCAAAAGAGACACTTTTGCTTACTGATATAAATGCA
GATGCTAAAAAGCTTGCCAAGCTCAGATAAGATTTAGACAAAATGCTATTCTTTGATGAA
AGAGGAAAAGATAAAAGCGTGAAGGTGACTGTAGATCCAAATGACTACTCCTCTTACTTT
TAAAAGATTGATTAAAAGTTCAACAAACTTAAGACTGAATATGAAGATGATTTGATAAGA
ATGTTTGAAGAGTATACTTCTTATGATAAGGATGATTTGATATGCCACACATCAATCTTA
CAAAAGACACTAAAAGAATTCACTCATGAGATTTGGTCTTCTGTCATATCAATCACTTGC
CCTCATTGTTAGGAAAAGTCTCCATCATTCAGGAAAGATGGCTATACTAAATTCTTCATG
AAACCTCTTTCTGATAAAATTAAGAATTAGATGAAGCAGTAAGATAGATTGACAAAGGGT
TCATCTAAGCATTCACAAAAAGATACTGACATAGAAGGCTTTGATATCATAAATGATGCT
TCAACTACAGGAGCACTTTCCAGAAAAGAATCACATAATGATCACACAACTGTTATTTCC
TCTTAAGATTAATACTCTTAATCAGGAGTGAATTTTGACGATGAGGAGGAGGAAGAGGAT
GACGATCTCGAAAATATGACTCATCAGAGATTATTATGTTAAAATGAAGTCCAAGACCAC
TTAATCCATATGTGGAGAAATGAAAAAGCTCTTTTAGATATTATGTTTGGTAGATTCTAT
CCAGTTGAGGATGGCTAACCATTAGAGAATGATTCATTAGGTCCTTAAATGTTTTTCTTG
AAAAAACTTCTCGTTCCACCTAATAGATTCAGACCAGAGAGTTAAGGAGCTTTTGGAGGT
GCTGGCGGAGGTCAAGGTGACAAAGCTTATTTACACGCTCATAGTGCCATGGTTCAAAAG
ATTCTTGTCAATAATTTGGCATTAAAAGATGCCATTCTTCATTAAGATCAACTAAGGCAA
TAGACTGGCAGTCAAGATACAAAAGCTAGTAATGATGTCACTCAAAAATGGATCTCACTT
CAAGATTCTATTAACACTTTTATGGATTCATCAATGGCATAAAAGACAGCAGATAAAGAA
CAAAACGGAATCAGGTAGTTGCTTGAGAGAAAGGAAGGTATGTTTAGAATGAAAATGATG
GGAAAGAGAGTGAACTACGGAGGCAGAAGTGTTATCTCTCCAGATCCATATATCACTACA
GATTAAATTGGTGTCCCTATATTTATGGCAAGAAGATTAACATTCCCTGAATCAGTAGCT
GAGGTAAATGCTGAGCACTTAAGAAAATTAGTCATGAACGGACCCAAGTAACATCCAGGA
GCTAATATGATAGAAGACGAAGAGACTGGAGTTAGAACTAACCTAGAATCAATGAGCTTT
GATTAGAGAAGAGGTCTTGCTCAATTGTTGACTGTTGGTAGAAAAATTGTATATCGCCAT
CTCAACACTGGTGATGTACTTTTGGTAAACAGATAACCAACTCTTCACAAGCCAAGTATT
ATGGCACACATTGCAAGAATTCTCCCCAAAGAGCAAACCATAAGAATGCATTACGCTAAT
TGCAGTACTTACAATGCAGATTTTGATGGTGATGAAATGAATCTTCATTTCCCATAAAGT
TATTTAGCTTGTTCAGAAGCATATAAGTTAATGGCAACTCATAAGCAATACATAGTGCCT
ACTAGTGGAAAACCAATTAGAGGACTTATTTAAGATTCAGTTGTTTCAGGAGTGTTCCTT
ACCTCAAAAGACACTTTCCTTACCAAAGAGACCTATCAACAACTAGTTTATGTCGGTTTG
AGAGAGCTTATTGAAGAAGATAAAATTGGGAAAATATTTACACTTGCACCTGCTCTCCTT
AAACCAGTCCCAAGATGGACAGGTAAGCAAGTCATTTCAACAATCATTAAGAACATTGTC
AACCAGGAGATGGATTACAAAATTAATAATATTACTGGATTAAATTTGGACTCAAAAGCA
AAGCTTTCACCCAAGGAATGGGGTTCAATTGGTCAAGAGGAAGGAGATGTTGTTTTTAGA
GATAACGAACTTTTATTAGGAACTCTAGATAAAAATCAATTTGGTGCTTCTGAGTTTGGT
TTAGTGCACTCTTTCTATGAAATTTATGGATCCGAAAAAGCTGGTGAGCTCTTAACATCT
CTAGCTAGAATCTTTACTGTATTCCTATAAATGCACGGCTTTACCTGTGGCTTAGAGGAT
CTTATGATTACTCCAGAGTTCAATAAACAAAGAAGACTGATTATCGAAAATGCACATAAG
GAAGGTATTGAGGCTGCAGCTAAATTCTGTGGAATTAAGAACTATATTGCTAAAGAATTC
AACTACTCAAATAGAATCGTCTATCAATCTGGAAAGAACAAAATTGACTAGGATATTGAA
AGATTCACAAACATGGCTGTTCCTGAGAATCCATTCAAAAACAAGAAAATCATTCAAGAA
GATGACCCTATAAGAAAAAGACTAGAGGAAAAAATGAACTCAGCCGATGATGTTTAAGCC
TTAGATGCTGAACTTGATAACGTTATGAGAAGCAAAATGAGTCAGGCAACCAGTCAAATT
TTGAAGATCTGTATCCCAGACGGTCTAGTCAAAAGATTCCCAAGAAACAACATTTCAGCT
ATGGTCTTGACAGGAGCAAAGGGAGGTCTAGTTAACATGACTCAAATTTCTTGCCTTTTA
GGGCAATAAGAACTTGAAGGCAAACGTGTTCCTAAGATGCAAAACGGTAAGACATTGCCT
TGCTACTTACCATATGATCCAAATCCAAGAAGTTCAGGTTATGTTACAGATAGATTTATT
AGTGGATTAAGACCATAAGATTTCTACTTCCATTGTATGGCTGGAAGAGAAGGTCTTATC
GATACTGCAGTCAAAACTAGTAGAAGTGGCTATCTCCAAAGATGTTTGATTAAATAGTTA
GAGTCATTAGTGGTAAATTACGATATGACAGTAAGAGATAATGATGGCTCAATCGTCCAA
TTCCTATATGGTGAAGACGGAATCGATGTAATGAACTCAAAATATCTTGAAAAGTTTGAC
TTTTTAGAGAAGAATTTTACTTCTCTTATCACTACTTATAATGGTTCTGAGATCATGCAA
AGAGTCGATAGAAATGCTGTAGATGATTATAAACACAAAGCAAAGAAAGTTCTCAAGAAA
ATGAAGAAGGAAAATCCAAGTATTACTAATCATGAATTAAAGAGATACAGAGGTGATCCA
GCAATATCTTTATATCATCCTTTGAAGTACTTTGGATCAATTTCTGAGAAAATGGACAGT
AAGCTCAAATCTTACCTCGAAAACGATTCAATGTAATAACTAACAGCAAAGATGGGTAAT
ATGGCAATGAAGCAAAAGTTTGAGCCAATAAAGGGAGATACCTTCAAGAAAATGTATTTC
CTAAAGTACATGAAATCAGTTGTCCATCCTGGTGAAAATGTTGGTACTATTGCTGGTCAG
TCAGTCGGAGAGCCCTCTACTCAAATGACCTTAAACACTTTCCATTTGGCTGGTCATGGT
GCTGCCAATATGACTTTAGGTATTCCAAGATTAAAGGAAATACTTATGACCACTCCAACT
AACATCAAGACCCCAAATATGATTGTATACTTCAGAAGAGAACTCTCTCTCATTAAAACT
GAAATGGAGATGTACGCTAACAGATACAAGAGAATTAAGCTCTGTGATGTAACTAAAGAA
CTTAAAGTCACTCAGGAAATCGCTACTGATGATTCAGGAAACATCCTTAGATTGTATAAT
ATCACTCTTTAAATCGAGAGTGTGAGAAGAATCGCTAAGTACCTAGGACTAGAGTTCAAG
GATTTGGTAAAGGTATTTAGTGATCAATTCATCCCACTGCTTATGGCTGAAATTCTTAAA
TAACTTAAGAAAGCAAGTTAAGATTAAGGATAAGACGATGTCTAGACCAACCCAGGCACT
AAATCTACTTTGAATGCTTCAAAGATTACTAAAAAATTCAAGGCAAATGGAGATGTTGAT
GAGGAGTTTGATGTTGATAATGAAGATGAAATCGTCAAGCAAGCTAGTCAGAAGAGCAAA
AGTAGTGTAAAAGGCGACATGAATGTTGATGAGGATGAAGATGAGAATGAAGATGAAGAT
GATATGATGGATATCGATGGAGTTGAAAAGAAAGCCAAAGACATCAAGGGATACGAACAA
GAAGACGAGGAGGACAGAGACTTCCTTAGAAGATCTTCTAATAACAGATCAGAGTCAAAA
CAAAAAGAAGATGAGGAAAAGAACATGAACTATTATTGCAACATTTTAAGAGAAAAGTTT
TCAAAGTATCAAGGTTACATTAGAAAGATTGGTTATGAAGACGATAAATCAATGACCGTG
ACTCTTGGGTTCCCATTACAATTCAAAAAGATTCTCATGCTCACTGTAGCTGAATAAATT
TTGGCAAAGGTGTTGGTTAGATCAGTTTCTGGAATTGATAATTGTATTCTTGTTACACCA
GACAAAGCTAATGAAGAACCATACTTACTCGTCTAAGGTCTTAATTTTGAGGCATTCTAC
AATGATCAAGATATTTTTGACGTAAATAGAATATAATCAAACGACATCTGGCAAATCATG
AAAAAGTACGGTGTTGAAGCTGGTTGTGCTAATCTCGTCAAAGAAGTCAGATAAGTCTTC
AACATGTATGGTATTGAAGTAAACTACAGACATTTGAGTTTGATTGGAGATTTCATAACA
AACAATGGAGAGTACAGAGCCTTCAATAGAATCGGAATGGAAGAGAGCAGCTCTCCTTTC
TTAAAAATGAGTTTTGAAACCACAATGAAATATCTCGTGGCAAGTTGCGTATAAAAAGAT
ACTGATGACCTTAGCACTCCCGCATCTGCCTTGGTTCTTGGTCAAGTACCTAAAGTGGGC
ACAGGTATCTTTGATATTATTCATGATCCAGATTACGCTCTCGCTTGA

>Contig17704.0.g32(protein)
MFKLDNELIKDRFAATSFSFYTEQEIEKLAVKQILNPTAFDHLNNPTNGGIYDKALGVSP
FDHRAQCVTCGLDCQYCPGHLGYIELTAPCYNPFLINQLYKLLKSKCIKCHRIRIHPKKI
DIYIQCLQLIKSGQIVGSQVLKNYFLNAAKETLLLTDINADAKKLAKLRQDLDKMLFFDE
RGKDKSVKVTVDPNDYSSYFQKIDQKFNKLKTEYEDDLIRMFEEYTSYDKDDLICHTSIL
QKTLKEFTHEIWSSVISITCPHCQEKSPSFRKDGYTKFFMKPLSDKIKNQMKQQDRLTKG
SSKHSQKDTDIEGFDIINDASTTGALSRKESHNDHTTVISSQDQYSQSGVNFDDEEEEED
DDLENMTHQRLLCQNEVQDHLIHMWRNEKALLDIMFGRFYPVEDGQPLENDSLGPQMFFL
KKLLVPPNRFRPESQGAFGGAGGGQGDKAYLHAHSAMVQKILVNNLALKDAILHQDQLRQ
QTGSQDTKASNDVTQKWISLQDSINTFMDSSMAQKTADKEQNGIRQLLERKEGMFRMKMM
GKRVNYGGRSVISPDPYITTDQIGVPIFMARRLTFPESVAEVNAEHLRKLVMNGPKQHPG
ANMIEDEETGVRTNLESMSFDQRRGLAQLLTVGRKIVYRHLNTGDVLLVNRQPTLHKPSI
MAHIARILPKEQTIRMHYANCSTYNADFDGDEMNLHFPQSYLACSEAYKLMATHKQYIVP
TSGKPIRGLIQDSVVSGVFLTSKDTFLTKETYQQLVYVGLRELIEEDKIGKIFTLAPALL
KPVPRWTGKQVISTIIKNIVNQEMDYKINNITGLNLDSKAKLSPKEWGSIGQEEGDVVFR
DNELLLGTLDKNQFGASEFGLVHSFYEIYGSEKAGELLTSLARIFTVFLQMHGFTCGLED
LMITPEFNKQRRLIIENAHKEGIEAAAKFCGIKNYIAKEFNYSNRIVYQSGKNKIDQDIE
RFTNMAVPENPFKNKKIIQEDDPIRKRLEEKMNSADDVQALDAELDNVMRSKMSQATSQI
LKICIPDGLVKRFPRNNISAMVLTGAKGGLVNMTQISCLLGQQELEGKRVPKMQNGKTLP
CYLPYDPNPRSSGYVTDRFISGLRPQDFYFHCMAGREGLIDTAVKTSRSGYLQRCLIKQL
ESLVVNYDMTVRDNDGSIVQFLYGEDGIDVMNSKYLEKFDFLEKNFTSLITTYNGSEIMQ
RVDRNAVDDYKHKAKKVLKKMKKENPSITNHELKRYRGDPAISLYHPLKYFGSISEKMDS
KLKSYLENDSMQQLTAKMGNMAMKQKFEPIKGDTFKKMYFLKYMKSVVHPGENVGTIAGQ
SVGEPSTQMTLNTFHLAGHGAANMTLGIPRLKEILMTTPTNIKTPNMIVYFRRELSLIKT
EMEMYANRYKRIKLCDVTKELKVTQEIATDDSGNILRLYNITLQIESVRRIAKYLGLEFK
DLVKVFSDQFIPLLMAEILKQLKKASQDQGQDDVQTNPGTKSTLNASKITKKFKANGDVD
EEFDVDNEDEIVKQASQKSKSSVKGDMNVDEDEDENEDEDDMMDIDGVEKKAKDIKGYEQ
EDEEDRDFLRRSSNNRSESKQKEDEEKNMNYYCNILREKFSKYQGYIRKIGYEDDKSMTV
TLGFPLQFKKILMLTVAEQILAKVLVRSVSGIDNCILVTPDKANEEPYLLVQGLNFEAFY
NDQDIFDVNRIQSNDIWQIMKKYGVEAGCANLVKEVRQVFNMYGIEVNYRHLSLIGDFIT
NNGEYRAFNRIGMEESSSPFLKMSFETTMKYLVASCVQKDTDDLSTPASALVLGQVPKVG
TGIFDIIHDPDYALA