Identifiers and Description

Gene Model Identifier

Contig3087.0.g71

Standard Name

PHD2

Aliases

Contig3087_0_g71

Description

Ring finger domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Cellular Component

• anaphase-promoting complex (IEA) | GO:0005680
• nucleus (IEA) | GO:0005634

Molecular Function

• nuclease activity (IEA) | GO:0004518
• thiol oxidase activity (IEA) | GO:0016972
• ATP binding (IEA) | GO:0005524
• zinc ion binding (IEA) | GO:0008270
• protein binding (IEA) | GO:0005515
• ubiquitin-protein transferase activity (IEA) | GO:0004842

Biological Process

• oxidation-reduction process (IEA) | GO:0055114
• DNA repair (IEA) | GO:0006281

Domains

• ( pfam13639 ) Ring finger domain
• ( pfam13923 ) Zinc finger, C3HC4 type (RING finger)
• ( pfam13920 ) Zinc finger, C3HC4 type (RING finger)
• ( pfam12678 ) RING-H2 zinc finger
• ( pfam00097 ) Zinc finger, C3HC4 type (RING finger)
• ( pfam14369 ) zinc-finger
• ( pfam04423 ) Rad50 zinc hook motif
• ( pfam12861 ) Anaphase-promoting complex subunit 11 RING-H2 finger
• ( pfam00628 ) PHD-finger
• ( pfam14446 ) Prokaryotic RING finger family 1
• ( pfam04777 ) Erv1 / Alr family
• ( pfam13445 ) RING-type zinc-finger, LisH dimerisation motif
• ( pfam12773 ) Double zinc ribbon
• ( pfam14447 ) Prokaryotic RING finger family 4
• ( pfam07975 ) TFIIH C1-like domain

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00059280	3.001003044337619e-17	hypothetical protein
SGD	YLR247C	0.00000008001913847069386	IRC20 SGDID:S000004237, Chr XI I from 633354-628684, Gen...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig3087.0.g71(coding)
ATGGAAAATTCCAATCCCTAAAACCTCTCTAACTCTTAAGATTTGAACTAGAAACTTGAG
AATGATCAGCTAGTCTTGAGACAAGGAGTCTAGTAAGATGCTCAGAGGGAAGATCTGAGT
TAATCTAATCCACACATTGATAAAAACTCAGATTTCAACTAAGTATCATTGCAGATAGAG
TCGGATGAGCAAGATTTTGGACAAAAATAATCAACTGAGATGATAGTTGATGAATCACTT
AGAGATGGAACTTAAAATCATGATGAGGAGATAGATGTATCTTACAGATTAGTGAACAGA
AAGTTCTTTTGTTACTTGTGCCAGAGAGAGTTCAGCAAGATGGTTGCTCCTGATGATATT
CTTACTTGCGATTAGTGTCATGAGGGATTCTGTGAGATTATTGAGAAACCGAGGTCAATG
CTCGCGATTCAAGGAAATGATGGTGCTGCTTCTAATTTGGATTAGAATGTTGATGAAGAA
AAACGAAGAGCAAACGAGTAGTACCGGATTGTGTTCGAAAATTAGGCAGCTGCGAATGCT
CACAACAGACTAGACATTCACAACAGGTCAACTCAAAACCTCTATGGTGAGCCTGAGACG
ACTGCTCAACTTAGAAGAAGAGAACAATAAATGAAGTAGGAGGAAGAGAAGAAGCAGAGT
TTCAATTAGCAGTAGTAGAGGAGAGCATAGCAACAACCACAGCAGTAGCAGAGACAAGGA
GTGGGAAGAGGTGGCTAGTTCTAGTAGCTATCCAACAGATAGAATCCATTCAGAGGTACA
GCAGGATCTAACTTTATTGATAACTTCTTACTGGATCGCCTTTCTTTATGGGATTTGGAG
CTGGACCAAGTGCAAGCAGACCTTAAAGCTAACTATTAGAGATCCTTTGGATCTTCAATG
ATGAATGAAGATCAGTTCTTAGGTTAGTTCTTCAGACCTTTTAGCTTTGGGTAGATATTT
GATGATGACCAATTCACTGGCTTCAACTCTTCTTTCAATTTCAATCCCAATGTCTTTGCA
ACCAACTTCTCTCAGAACTTCCGTTCTTTCGGTAACATGGATGATATCCTCCAGAGAGTT
ATCGATATGACAGCTCAACAGTAGCAAGAGCACAAAAAACCAACTAAGAAAGAAGCTATC
GAGAAGATCCCAGTTGTTAATATCTCAGAAAAGCACTGCAAGAAAAAGGATGGCAGTGAT
TAGTTGGAGACACCTCTGTGTACTGTTTGTCAGGAGAATTTGCCAATAGGTGAAAAAGCT
ATGATTATACCTTGCGGGCACATCTTTCACCCAGATTGCGTCCTACCTTGGTTGAAAGAT
CACAATACTTGCCCTGTTTGCAGGTATGAACTACCAACTGATGCATAGTGA

>Contig3087.0.g71(protein)
MENSNPQNLSNSQDLNQKLENDQLVLRQGVQQDAQREDLSQSNPHIDKNSDFNQVSLQIE
SDEQDFGQKQSTEMIVDESLRDGTQNHDEEIDVSYRLVNRKFFCYLCQREFSKMVAPDDI
LTCDQCHEGFCEIIEKPRSMLAIQGNDGAASNLDQNVDEEKRRANEQYRIVFENQAAANA
HNRLDIHNRSTQNLYGEPETTAQLRRREQQMKQEEEKKQSFNQQQQRRAQQQPQQQQRQG
VGRGGQFQQLSNRQNPFRGTAGSNFIDNFLLDRLSLWDLELDQVQADLKANYQRSFGSSM
MNEDQFLGQFFRPFSFGQIFDDDQFTGFNSSFNFNPNVFATNFSQNFRSFGNMDDILQRV
IDMTAQQQQEHKKPTKKEAIEKIPVVNISEKHCKKKDGSDQLETPLCTVCQENLPIGEKA
MIIPCGHIFHPDCVLPWLKDHNTCPVCRYELPTDAQ