Identifiers and Description

Gene Model Identifier

Contig12963.0.1.g3

Standard Name

HMGB1h

Aliases

Contig12963_0_1_g3

Description

HMG (high mobility group) box

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• DNA binding (IEA) | GO:0003677
• protein binding (IEA) | GO:0005515
• ATP binding (IEA) | GO:0005524
• zinc ion binding (IEA) | GO:0008270
• hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (IEA) | GO:0016818

Biological Process

• regulation of transcription, DNA-templated (IEA) | GO:0006355

Domains

• ( pfam00505 ) HMG (high mobility group) box
• ( pfam09011 ) Domain of unknown function (DUF1898)
• ( pfam06382 ) Protein of unknown function (DUF1074)
• ( pfam06244 ) Protein of unknown function (DUF1014)
• ( pfam04690 ) YABBY protein
• ( pfam08073 ) CHDNT (NUC034) domain
• ( pfam05508 ) RanGTP-binding protein

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00784710	0.0000009995106777214876	HMG box family protein
SGD	YBR089C-A	1	68.2

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig12963.0.1.g3(coding)
ATGAGCAATTTAGGGACTGGGGATTCAGAAATAACATTCTCAAACGTCACAGGTGACTTA
CAATCTCAAGTATCATGCTCGCTCGAGGATAATAGTGCTTATCACAGCAGATAGTAGAAG
ATTCTTGACGCTATGAAGGATGCGCCAGGAACTAAACCTATCAGTTTTTATGAAGAATCA
CAAATTGCTAAAATCTATGGAATGACTGAAGATTACACTCCTCCTAATCGTACAAAATCT
GCTTATCAAATTTTCACTGAACATAAAAGGGAAGAGTTATTAGAAGAAAAACCAAACATG
ACTTTAAATGAATTGACTAGAGAAATAGCTAAACACTGGGCAAGATTGGATAATGATTAA
AAAGCACGATTTGTGGAAGAATCAGCAAAAGATAAGGAAAGATATATAAATGAAATGAGA
AATTTGCCAGTACCCCTATATAGAAACAAGAGACCAAGAAGACCAAGAGACAGAAGAAAA
CCAAAGAAAGTCTTAACACCCTATATGTTTTTTGTCAAAGAAAATAGACCTAGAATCATG
CGAGAAAGTCCGAATATGACATTTCTTGAAGTAATGAGAGAAGTGGGAGTAAGATGGAGC
AAATTAAGTGAAGTAGAAAAGGAGCCATTTAAAGAGAGATCATTAGAAGACAAAAGAAGA
TTTTTAGAAGAGCAAGAGGTGTTTATCAGATAAAGATTCGCTTTCCCTTCAAATACTTTT
GATCAAAGACTTGCTTAAGGATAGCCACAACAAAAAAGACCAATAACTGGTTTCTAAATG
TACTTAAGAGAATTAAGAGAGAAAACAAAGAAAGAAAATCCAAAATTATAAATGGGTGAA
TTTATGAAGCAAGCCTCAATGAACTGGACTAGAATGAGTCAAAAAGAAAAGAAGATGTAT
GATCATATGGTTGAAAAGGATCGAAATAGATATGACGAGAAATATCAAGATTTTAAAAAG
CAATAGACCATGCAAATGGATATACCTGACTCACAAGCTTTATCTATGATGGGTGCTTCT
GATACTTTTTCAGAAATTGATAGTGGTTATATCTTAAATAAGGATGAATTGAGTTAAATG
ACGTGTAAAACTCACAAATCACTAAATAGAATTGCCAAATTTGATCAGATTTAAAGTGGA
GATAGTAAAAATAAAAGTTTAGACTTTACAAGCAAGTGTAAATTGCTTAAAAATGGTGCT
ATAAAATTTAACCCAGAAGATAATGACGAAGACTCTGATATTTAATTAGATTGA

>Contig12963.0.1.g3(protein)
MSNLGTGDSEITFSNVTGDLQSQVSCSLEDNSAYHSRQQKILDAMKDAPGTKPISFYEES
QIAKIYGMTEDYTPPNRTKSAYQIFTEHKREELLEEKPNMTLNELTREIAKHWARLDNDQ
KARFVEESAKDKERYINEMRNLPVPLYRNKRPRRPRDRRKPKKVLTPYMFFVKENRPRIM
RESPNMTFLEVMREVGVRWSKLSEVEKEPFKERSLEDKRRFLEEQEVFIRQRFAFPSNTF
DQRLAQGQPQQKRPITGFQMYLRELREKTKKENPKLQMGEFMKQASMNWTRMSQKEKKMY
DHMVEKDRNRYDEKYQDFKKQQTMQMDIPDSQALSMMGASDTFSEIDSGYILNKDELSQM
TCKTHKSLNRIAKFDQIQSGDSKNKSLDFTSKCKLLKNGAIKFNPEDNDEDSDIQLD