Identifiers and Description

Gene Model Identifier

Contig9372.0.1.g13

Standard Name

SEN1b

Aliases

Contig9372_0_1_g13

Description

AAA domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• RNA helicase activity (IEA) | GO:0003724
• DNA binding (IEA) | GO:0003677
• hydrolase activity (IEA) | GO:0016787
• helicase activity (IEA) | GO:0004386
• ATP binding (IEA) | GO:0005524
• RNA binding (IEA) | GO:0003723

Domains

• ( pfam13087 ) AAA domain
• ( pfam13086 ) AAA domain
• ( pfam13245 ) Part of AAA domain
• ( pfam13604 ) AAA domain
• ( pfam01443 ) Viral (Superfamily 1) RNA helicase
• ( pfam05127 ) Helicase
• ( pfam04851 ) Type III restriction enzyme, res subunit
• ( pfam00910 ) RNA helicase
• ( pfam01695 ) IstB-like ATP binding protein
• ( pfam13401 ) AAA domain
• ( pfam13481 ) AAA domain
• ( pfam00004 ) ATPase family associated with various cellular activities (AAA)
• ( pfam14011 ) EspG family

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00011340	6.00277790667473e-79	conserved hypothetical protein
SGD	YLR430W	1.0002012508493003e-67	SEN1 SGDID:S000004422, Chr XII from 993434-1000129, Gen...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig9372.0.1.g13(coding)
ATGAGCATTCAGCCAGAGCTATACAGGTTTCATGAGTAAAATGAAGACGATAATGAATTG
TTCAGAGAGTTTGAAATGCAAGAGTAGCTTTTAAAGTAGCAGAAAATTAAGCAAATTCAA
GATAAAATGCTAGACCTTAAAGCCAAGAAATAAAGAATTAGTACTGACTCAGATTCAGAG
ACAGAATCCGAAGATGATCTGACTGAGTAGTTGAAAAACTTTCGCAATTAAGATAAAATA
TCTGACCAGAAAAAGCTATTACAATCGAAGTTGCAGGGAGATGGAAGTGGACGCAAGAAT
TTGTTGGACATTTTAAACTCAAACGATGATGAAGGCATATCACCATTGAAGAATCAGAAA
ATGAGAGGGATGGGAGGTGATCCATTGAGTTTAAATCTTGGTCTTACAGAAAGTGAGAAA
AAGTTTGACTCCATCAGGAAATAGTACGAGTTATCTAGAGGACTTGAGTAAAAGTCAAAG
CAAGATAGTGTAAAAAAGCAAAAGACAGATGAGTAAATAAGACTTGAGAAGATAAAGTCA
GAAGCCAAGAAACTCGAATTTATGGAATTATTTGGAGATGATTAGGATGACAAGAAAGAA
GAGAAAAAGGAGGGGCTAAAGCTTGACTTCCTCTAATTAGAAACAGTGAGTCTACCATCT
TAACATGGCTAACCTCTTCAAAATAAGTCTTTCTTAACTAAAGATTAACAAAGGAAAAGT
TTGATGTCTCATTAGGATTCGCTTTTCTATGAACAGAGAAGATAAAACAAAAAGAACATT
GACTCATTCATAAGATCAATTCTTAACCTCGACATCATAGACATGTTTAAGAATCAACCC
TTCTTTGAAAAAATACCAGATGATTTCCCTCAGGGACACCGCTAATACTTGAGAGTTTGG
GAGAAACTTTTCATGTATGAAACCTACAACATCATAGTAAACTCAAAGAGAAGTGAAGAA
AAAGTATCGACTTAATTCGAATAGTAGAGAAGACCATAAAAATCGTTGTCTTGGGTAGGG
TATTTAATTAAGAGCAATGAGGACATCAACTTTGTTAATGCTAGACTCTATGACAAAAAA
CCTTCTTTAGCTTTAGATAAGAATAAGAGACCAAGGCCAGGAGCAGATGACTCTAAAGAG
AAGAGTAATTAACAAGAAAGCGATGAGTTTTCCCCCTTAAGAGGCATAAAAGAAAGTGAT
ATTCTAATAATTTCAACTGTTGATCTAATTGCGCAGTCTAAACAGAGAGTTGATGATATT
AAGAAATTAATAACACCTGAGTGGCTAAAAATCAACCTACTTGTATCAAACTCTATGTTC
GCTTATGTCTCTTAGAGAAGTTAAAAAGGTGCTACATTTTTAGAGGTGAAGTTAGATATC
TCAAAGAGTTCTTTTCTGAGAAGAATAGAATATAAAACTCTGAGAATGAGTGAATTCTAT
GGGCTTACAGATACTATTTTAATGCCAAAAACTGCTTTATAATTGATACAAAAGAGTTGC
GAGTATCATAAGAATACCATTTAGATGTAATAGTTTGTTCAACAATTTGGAGGAAAATTT
AATCCATCATAAAGAGAGGCACTAGTAGAGGTCACAAAAATGGTAGATGACTAGCTCTTA
TTGATTCAAGGTCCACCTGGAACAGGGAAGACTCATACTATTACTGGTATAATTTCGATG
TTGATCAGATCCGGGGTTGAAAAAATTCTTGTGTGTGCCCCTTCTAACGCAGCTGTTGAT
GAAATAATTACAAGAATAAATTAAAGAGGCTTAGTTGGATTGGATTTGAAGAAAGATGAT
ATAGTTGAAATGATGGTAAGAATTGGATCGATGGATTATGAGCCCTCACCACAAGTAAAA
CCTCACACTCTAGATCAAAGACTGATCTTAACCCTTAACAGTTAGATGCTTCATGACAAC
AAAGTCAAGATAAACTATTGTGAAGAGATACTAGATTTACTTAAAAAGAATATTCAATTA
TCTGTTGAAGACAAGAATCACAAAATCTATTTGTAATCTCTAGTTGGCTAGAATCTAAAG
AAGCTTAAAGATTTTTTCAAGAAGTATCCCACAACATTTGACTAGAAAAAGTTCTTTCTA
AACATTAAGGAGCGCTTGATGGCTTAGAACTCTAAGATAAAGTAAAATATGGAAGAAAAC
AGATAGAGTTAAGGAGGTGATTGGAGATATGTAGAAAACTAAATTATCCTTAAATCTAAA
ATACTATGTTCTACCCTCTCGATGGCTGGTGTTGAAAAATTTGATATCGTAAAGGATCAA
GTAGAATTTCTCATAATAGATGAAGCATGTCAGTGCATAGAGCCCTCAACTTTAATCCCA
TTTGAGCTTGGACCTGCCAGAGTCATTCTAGTTGGTGATTAAAATTAGCTTCCTGCTACA
ACTTTCTCAGACAATAGTGAACGCACTAAATATAGCCGTAGTTTCTTTGAACGATTACTT
GATAATGGATATTAGAGGTACATGCTTTAAATACAATACAGAATGCATCCAGTTATTAGA
TAGTATCCATCTCAAACATTTTATGAAAACAGAATTACAGATGACAAGACTATCTCTACA
AGAGAGATTCCTCCGGTTATTGAAAGCATAAAAACTTACTTTACTCCATCAGTCTTTTTC
GATTTAATAAATTCATAGGAAACTTTAGCTGAGACGTCCAAATCTAATAATGAAGAAGCA
TAATTTACTCTCAATTTGATTTAACTGTTAAAAGAGATAAGCAACTAAAGTAAGTCTGCT
GCACAATAGAAAAGTAATAGCTTTGATTTTTTGAAGAACAAAATAGGAATCATCACTCCC
TATAAATCACAAGTTAAAATCCTGAAGGATTAGATTGCTCCTTGGTTGCGATCCATTGGC
TCAAGACTGCAAGATATTGAAATAAATACTGTTGATGCCTATTAGGGTAGAGAGAAAGAT
ATAATTATCTTCAACTGCGTTCGAAGTAATTCCTCAAATCAGTTAAAGAACTCGCTGGGC
TTCTTGGTTGATAAGAGGAGAATGAATGTGGCAATTACTAGAGCCAAACATTTCTTGTTT
GTAGTAGGCAACAGTAATACTCTTAATAGGGATTAGACTTGGAAAGGCCTAGTTGATTTC
TGCAAGAATTAAGTCTAAAGTTTGACAATGAAGTATTATGAAAACGTGAGCGACTACATG
AATGGTTACTATGCTTTTGACCAGAGATAAGATTATGAGCTTAATTCTTTGAAACAACAA
TTCGTCTGCCAACAATAATTAACTGCCATGCCATAGACTGCAAATGGTCAAAATCCTACT
ATAGACTATAAAGCTGAGTAGCTAAACAATCAGTAAAATACTCAAAGTGATAGTAGCGAA
GATGATGAAAAGATGGAAGATTTACCAGCAACAAGTCAATAAGCGTTGGTGAGTAGCTCT
ATTCATAGTACTCCCAGATCTATGCTCAAAAGAACAATTGATTAAAGAATACTTGATGAG
ATTAATGGCAACCTCTAGGAAAATACTATTGATGATAGCTAGGTAAACATGTCAAGTCAT
GGATATGTAGAAGCAGGCAATGGATTTCACCAAAATAAGAGACTTAATACTAATTAATGA

>Contig9372.0.1.g13(protein)
MSIQPELYRFHEQNEDDNELFREFEMQEQLLKQQKIKQIQDKMLDLKAKKQRISTDSDSE
TESEDDLTEQLKNFRNQDKISDQKKLLQSKLQGDGSGRKNLLDILNSNDDEGISPLKNQK
MRGMGGDPLSLNLGLTESEKKFDSIRKQYELSRGLEQKSKQDSVKKQKTDEQIRLEKIKS
EAKKLEFMELFGDDQDDKKEEKKEGLKLDFLQLETVSLPSQHGQPLQNKSFLTKDQQRKS
LMSHQDSLFYEQRRQNKKNIDSFIRSILNLDIIDMFKNQPFFEKIPDDFPQGHRQYLRVW
EKLFMYETYNIIVNSKRSEEKVSTQFEQQRRPQKSLSWVGYLIKSNEDINFVNARLYDKK
PSLALDKNKRPRPGADDSKEKSNQQESDEFSPLRGIKESDILIISTVDLIAQSKQRVDDI
KKLITPEWLKINLLVSNSMFAYVSQRSQKGATFLEVKLDISKSSFLRRIEYKTLRMSEFY
GLTDTILMPKTALQLIQKSCEYHKNTIQMQQFVQQFGGKFNPSQREALVEVTKMVDDQLL
LIQGPPGTGKTHTITGIISMLIRSGVEKILVCAPSNAAVDEIITRINQRGLVGLDLKKDD
IVEMMVRIGSMDYEPSPQVKPHTLDQRLILTLNSQMLHDNKVKINYCEEILDLLKKNIQL
SVEDKNHKIYLQSLVGQNLKKLKDFFKKYPTTFDQKKFFLNIKERLMAQNSKIKQNMEEN
RQSQGGDWRYVENQIILKSKILCSTLSMAGVEKFDIVKDQVEFLIIDEACQCIEPSTLIP
FELGPARVILVGDQNQLPATTFSDNSERTKYSRSFFERLLDNGYQRYMLQIQYRMHPVIR
QYPSQTFYENRITDDKTISTREIPPVIESIKTYFTPSVFFDLINSQETLAETSKSNNEEA
QFTLNLIQLLKEISNQSKSAAQQKSNSFDFLKNKIGIITPYKSQVKILKDQIAPWLRSIG
SRLQDIEINTVDAYQGREKDIIIFNCVRSNSSNQLKNSLGFLVDKRRMNVAITRAKHFLF
VVGNSNTLNRDQTWKGLVDFCKNQVQSLTMKYYENVSDYMNGYYAFDQRQDYELNSLKQQ
FVCQQQLTAMPQTANGQNPTIDYKAEQLNNQQNTQSDSSEDDEKMEDLPATSQQALVSSS
IHSTPRSMLKRTIDQRILDEINGNLQENTIDDSQVNMSSHGYVEAGNGFHQNKRLNTNQ