Identifiers and Description

Gene Model Identifier

Contig19419.0.g47

Standard Name

SKIV2a

Aliases

Contig19419_0_g47

Description

DSHCT (NUC185) domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (IEA) | GO:0016818
• nucleic acid binding (IEA) | GO:0003676
• helicase activity (IEA) | GO:0004386
• ATP binding (IEA) | GO:0005524
• ATP-dependent helicase activity (IEA) | GO:0008026

Domains

• ( pfam08148 ) DSHCT (NUC185) domain
• ( pfam13234 ) rRNA-processing arch domain
• ( pfam00270 ) DEAD/DEAH box helicase
• ( pfam00271 ) Helicase conserved C-terminal domain
• ( pfam08542 ) Replication factor C C-terminal domain
• ( pfam12073 ) Protein of unknown function (DUF3553)

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00316180	9.997093137033517e-262	DEAD/DEAH box helicase family protein
SGD	YJL050W	9.997093137033517e-262	MTR4 SGDID:S000003586, Chr X f rom 342522-345743, Genome...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig19419.0.g47(coding)
ATGAACAAAAAGAACGCAAAGTTAGATTAGATGTTTGCTGGCTTCAATGCAGTTGAAGAT
TCTGATGTGAATGATTCCAATGATGAGGAAATGCAGGTGGACTCAAAGCAACAGAACAGC
AATAACAACTCAGCTGGAGGTGACATCAACAAAAAGAAGAAGAAAAAGAACAAAAAGTCA
GGAAAAGCCAAGAGAGAAGCTGAACGCAATCTCACTGAACTCGAGCAGTAAATAGCCAAC
AAAGATTCTCAAAAGAGATAGAAAGCAGACAATGTAAATATGGGAAGCGAATAGGTCAAT
ACTGAGAAAGATTACTTTGATGAAGAAGAGGAAGAGAGATTGGCTAAAGAAGCAGAAATG
ATTGAGAAAGTCATTTAGATCGAGTAGAACATGGATTAAGTTGGCTATAATGAGGAAGAT
TACGAGGTTGAGAGAATGGAATGGCCTAATTGCATACATGAGTACGTTCAACCAAAGGGC
TATGATAGACCACCCTACAAGAGACCAGCTAAAAGGGCAAAGGAATACAAATTCACCTTG
GATAAGTTTTAGGAGAGAGCAGTCGAATGCATCGAGAGAAATGAGTCAGTCCTAGTAGCC
GCTCATACATCAGCTGGTAAAACTGCAGTAGCAGAGTATGCCATTGCTCTTGCTCTTAAC
AGCAAGCAGAGGGTTATCTATACCTCACCTATTAAAGCCTTGAGTAATTAAAAGTACAGA
GAATTGTAAGAGGAATTCGTGGATGTAGGGCTTATGACTGGTGATGTTACCATTAATGAA
TCAGCTTCCTGTATAGTAATGACCACTGAAATTCTTAGAAGTATGTTGTATAATGGTAGT
GAAATCACAAGAGAAATGGCCTGGGTCATTTTCGATGAGGTCCATTATATGAGAGATAAG
GAAAGAGGAGTCGTTTGGGAAGAGACAATGATCCTACTTCCAACAACTGTCAAGTATGTA
TTCTTGTCTGCAACTATTCCCAATGCTAGAGAGTTTGCTGAGTGGATCGTGAAAATAAAG
AAGCAACCTTGTTCAGTTGTATATACTGACTACAGACCCACTCCACTCCAGCATTTCATC
TACCCCATGGGAGGAGAGGGTATATACTGTGTGGTTGACTAAAACGGTCAGTTTAAGGAG
TAAAATTTCACCAAAGCAATTAGTGTACTCGAAAATGACATGAACTTAGATAAGATTCTT
GATGATAAAAAGAATAGAAACAAGACCACCTAGTAGAAAACTACTTAAAACTCAGAAATG
AAGAAAATCATCACACTTATTGTAGATAAGGGACTAGATCCATGTATTGTTTTCAGTTTT
TCAAAGCGTGACTGCGAAGCTTATGCTATGGCTCTTAAGGGTTGCGATTTCAATAAAGAT
GAAGAAAAGGACCAGATTAAGCTTATTTTCAATAATGCAATGTCCTCATTAGCAGAGGAA
GATGCTCAACTGCCCACTATTCAATCAATGTTGCCCTTATTATAAAGAGGTATTGGTATA
CATCATGGTGGTCTGCTTCCTATAGTCAAGGAAGTCATTGAGTTACTCTTCCAGGAAGGT
CTCTTAAAGATTTTATTCACTACTGAGACTTTCTCAATGGGTATCAACATGCCTGCTAGA
ACTGTAGTTTTTACGTCAATTGAGAAATTCGATGGTGATGAGTACCGCTGGATTACAGGT
GGTGAGTTCATTCAGATGTCCGGGCGTGCTGGTCGTCGTGGCTTAGACGATAGAGGAGTC
ACTATCATGATTGCTAATAAGAAACTCGAGCCTGATGTTGCTAAGAACATTCTCAAGGGA
TAGAGTGATCCACTTTACTCTGCTTTTCATTTGGGATACAACATGCTCTTAAATATGATG
AGACTTGAAGATATTAGTCCTGAAGATATCATCCTTAAGAGTTTCCATCAATTCTAAAAT
GAAAGAGCTTGCCCTCAGATGAAAGCCAAACTCACTGAATTAATAGCTGAATATAAATCA
ATCAACATTCCACTAGAAGATAAATATGAGAAGAAAACTAAATATATCAGTCAGAGACAG
TAGATTGACTAGAAAATTAACACAATTGTATGTGAACCAGAAAATATCATGCCATTTATG
GTCCCAGGCAGATTGGTTAAGATATGTTCAGAGCAGTAAGATTGGGGTTGGGGTATTGTA
GTAAGCTGGACTAAGCAAAAAATTAATCCCAAGAAGTTTATGATGGCAGCCAAGAGTAAA
ACCAGCCAGGCCTTAGACATTCTATCTTAGAATGAAAACCACTTCATCCTTGATGTCTAC
CTCTATGTGAAGAACAGATTGACAAATGACAATTTATTGCAGCCAGGTGACGCCAAAGCT
AAAGACGGCAGATTGGGAGTATGCCCAGTTATCATGCATCACACCAACATAGCTGCCATT
AGTACTATATAGGTAAACTTACCACATAACCTCAAGGACTAAGATAACGCCAAGCAAGTT
GAGAACATGTTCTTCTAAATAATGCAGAGATTCGAGTTTGGTGCAAAGATTCCCCTGTTA
GACCCCATCAAAGATATGGAAATTGAGAATTCAGAGCTTAAGAAATTTTTCAAAGCGAAA
ACTCTAATTGATAATGAACTTCAAAAGATCAATGAGAAATACTTGCAGAATCAATCAGTA
TCAGATCAACATGAGATATTATTTGCAAGAAAGAAAGAGATAAAACATACAATGACTGAG
TTAGAAGAAAGTGTAAAGAAAGCCAGTGAGATGATCATGAAGAACGACCTAGTTAACATG
AAGAGAGTTATGAGAAGACTAGAGATGTGTGAGAAAACTGATTAACCAACACTCAAAGGT
AAAGTTGCCTGCTCCATTTCAGCAAGTGATGAGCTCCTCGTTACAGAGCTACTCTTCTCA
GGTATGTTCCAAAACATGGAACCTAATCAGATTGCAGCACTGTGCTCATGTTTAGTATTT
ACAGATGTAAAGGGGGAGGTCAAAATGCCCAAAGAAGAGAAGTTTACTCAGCCATTTTAA
CTACTGCAATAAGCAGCTGAGAAAATTGCCACTATTATGGTTGAGAGTAAAATTCCATTA
GACAAGGAAGAGTATGTACAGAAGTTCAGACCAGACATAATGGAAATCACTTACAAGTGG
TGTTAGGGAGCCAAATTCAAGGAAATTTGTGAAATTGCACAGGATGTATATGAAGGCACA
ATTATTAGAGCTTTCCGTAGATTAGACGAATTACTTAGTCAAATGACAGAGTCTTGCAAG
ATTATTGGAAATATGGAGTAAAAGAGAAAGTTTGAAGAGGCTCAAAAAGGTCTCAAGAGA
GGTATTGTGTTTGCAGCATCACTTTATTTATGA

>Contig19419.0.g47(protein)
MNKKNAKLDQMFAGFNAVEDSDVNDSNDEEMQVDSKQQNSNNNSAGGDINKKKKKKNKKS
GKAKREAERNLTELEQQIANKDSQKRQKADNVNMGSEQVNTEKDYFDEEEEERLAKEAEM
IEKVIQIEQNMDQVGYNEEDYEVERMEWPNCIHEYVQPKGYDRPPYKRPAKRAKEYKFTL
DKFQERAVECIERNESVLVAAHTSAGKTAVAEYAIALALNSKQRVIYTSPIKALSNQKYR
ELQEEFVDVGLMTGDVTINESASCIVMTTEILRSMLYNGSEITREMAWVIFDEVHYMRDK
ERGVVWEETMILLPTTVKYVFLSATIPNAREFAEWIVKIKKQPCSVVYTDYRPTPLQHFI
YPMGGEGIYCVVDQNGQFKEQNFTKAISVLENDMNLDKILDDKKNRNKTTQQKTTQNSEM
KKIITLIVDKGLDPCIVFSFSKRDCEAYAMALKGCDFNKDEEKDQIKLIFNNAMSSLAEE
DAQLPTIQSMLPLLQRGIGIHHGGLLPIVKEVIELLFQEGLLKILFTTETFSMGINMPAR
TVVFTSIEKFDGDEYRWITGGEFIQMSGRAGRRGLDDRGVTIMIANKKLEPDVAKNILKG
QSDPLYSAFHLGYNMLLNMMRLEDISPEDIILKSFHQFQNERACPQMKAKLTELIAEYKS
INIPLEDKYEKKTKYISQRQQIDQKINTIVCEPENIMPFMVPGRLVKICSEQQDWGWGIV
VSWTKQKINPKKFMMAAKSKTSQALDILSQNENHFILDVYLYVKNRLTNDNLLQPGDAKA
KDGRLGVCPVIMHHTNIAAISTIQVNLPHNLKDQDNAKQVENMFFQIMQRFEFGAKIPLL
DPIKDMEIENSELKKFFKAKTLIDNELQKINEKYLQNQSVSDQHEILFARKKEIKHTMTE
LEESVKKASEMIMKNDLVNMKRVMRRLEMCEKTDQPTLKGKVACSISASDELLVTELLFS
GMFQNMEPNQIAALCSCLVFTDVKGEVKMPKEEKFTQPFQLLQQAAEKIATIMVESKIPL
DKEEYVQKFRPDIMEITYKWCQGAKFKEICEIAQDVYEGTIIRAFRRLDELLSQMTESCK
IIGNMEQKRKFEEAQKGLKRGIVFAASLYL