Identifiers and Description

Gene Model Identifier

Contig17485.0.g101

Standard Name

LIG4

Aliases

Contig17485_0_g101

Description

ATP dependent DNA ligase domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• DNA binding (IEA) | GO:0003677
• ATP binding (IEA) | GO:0005524
• DNA ligase (ATP) activity (IEA) | GO:0003910

Biological Process

• DNA repair (IEA) | GO:0006281
• DNA recombination (IEA) | GO:0006310

Domains

• ( pfam01068 ) ATP dependent DNA ligase domain
• ( pfam04675 ) DNA ligase N terminus
• ( pfam00533 ) BRCA1 C Terminus (BRCT) domain
• ( pfam04679 ) ATP dependent DNA ligase C terminal region
• ( pfam12738 ) twin BRCT domain

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00387050	1.0001043265246556e-154	DNA ligase IV
SGD	YOR005C	2.0008958828286524e-54	DNL4 SGDID:S000005531, Chr XV from 337343-334509, Genom...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig17485.0.g101(coding)
ATGCAAGAATCAAAAACTCGCACCAATAAATCAGGCTCAAATGAAGTAGTGAGTTTTTAT
GAAAAACGCAAGTCAGATGACTAAAAAACTGATGTTAAATTGAGTTCATTTATATAATTA
CTTGATCGGTTGGGTTAATCCCAGAAAACTCAATAAAAATTGCTATTGATAGAGAAATTT
ATAGAGCAATTCTATTCAGCTCATGATCACAGACAAATATTTCAGTTTATGCGGCTTTTG
ATGTCAAATTTAGATAGAGAAAGAGGCAATTATGGATTAAAAGAATCAGCACTTGCTAAG
TTTTACTCAGAAATTTTGCTCTTACCTCCTGCAGAGGCTGACAGATTGAAACATTGGAAG
AATCCAACTAAGTAACCCATAGGATCCCCAGCTGGAGACTTTGTAGGAGTTTTGGTTCAT
GTGATGAAGAATAGAGCGAGAAATGACTCAAAACTGACATTAAATTAACTAAATTAATTG
CTAGATTAATTGGCCAGGTCTTTTGATAATGAAAAAAAGAAGCAGATTTTAGCTAGAATT
GTATAAGATACGACAATAGATGAACAGAAATGGATTGCTAGAATCATCTTGAAAGATTTA
AAGATAGGTATAGGTTATGAGACAATCCTCAAAAGTTACCATCCAGACGCCTTAGAGCTT
TTTAATGCAACAAGTGATTTGAGGTCAGTATTTGAAGAGCTTTAAGTTTAAGAAGACTAA
GTCAGACAAGGTTCAGGAGGGAATCAATAAATGTTTAGAATGTTTTTCCCAATTAAACCT
ATGCTTGCTGGAAAACTAGCTCCATAGTAAATTGCTGAGATGGTAAGAAAAGAAGGGAAA
GTCTTGATCGAAAACAAATTTGATGGGGAGCGAATACAGTGTCATATGCAGGATGGAGTG
GTCAAGTTTTTCACAAGAAATTCGAATAATTACACAAGGATATATGGACCTGGAATGAGC
AAATACATCAAAGAAAACGTTGATGCTTAGGCTGTCATTCTAGATGGTGAGATGATTGTT
TGGGATAACTAGAAAAACTAGGTTGCACCTTTTGGTCAGAATAAGCAAGTAGCTCTCAGG
GAGTATGGAGTCTATGAAAATGCGCCACCAGAAAAGCCTTTCAAAGTTAAGTAATAACAT
TAACAGGATGGGGACAATTAAAGCGAAACTACCAAGAGTTAATCTGCAGCTGATGGTTCT
CATCTGTAACTCTGCTATAAGGTATTCGATATCTTGTATATAAAAGCTCATGGCGATAGC
GAGGAAATAAATTTAATGGGAGCTAGACTTCAAGACAGAAAAACTGTACTCTCTAGAATT
ATAAAAGAAGTTCCAAATACTCTTGAAATAGAAATGGGAAAAGAATGTGAGACGGTTGAC
TAAGTGTTTGATGAGTTCAATTAAAGCATTTACAAGAATGAAGAGGGAATTATTATCAAG
AAAATTGAATCTGTTTATAAACCAAATGAGAGGTCAGTTAACTGGATTAAACTTAAGGGA
GAATACATTGACAGTTTAGGTGATACTTTAGATTTGATAGTTATCGGTGGATACTTTGGC
GAAAGAAAAAGAATAGGAGGCAATGATTGGACAGATCATATTAATGTATTTCTTGTGGGT
GTAATGAAGAAGTTGGATAAATAGAATCCCTAAAACTGTGTAGTATATCCGTTTTCAAGA
GTAGGTACAGGTTATTCTATGGATGAACTTTCAAAGCTAAGAAATTAGCTTAAACCCTAT
TGGAAAATGTATGATGCCAGAATGCCTCCCGCTCTTTATGGTCGTTGGGTGCCTTCTATG
TCAGATAGACCCGATGTTTACATCACAGATGTCTCTAAATCTGTGATTCTTGAAATCAGA
GCTGGTGAGCTAGTCGTCTCTGATTAATACCCGACCATGTATACCTTGAGATTTCCAAGA
GTCCTGAAGATTAGATATGATAAAAACTGGGATGAAGCTTTCAGTCATTATGATCTTTAG
GATATGATTAAGAACTTCTAAGAATCTCGTAGACTTAAGAAGAAGGATAACGCAAAGGGT
ATTTATGAGCACAACGATGAAGATGAGGACGAATAATAAGACGGAAAGAAAAAGCGAAAA
AATAAGAAAAGAGCTATTTCAGAGGAAGAACTGAAAAGCAGGGATGGTTAAGCTTCAGAA
GATGGTTAAATTTATATCACTCATAAGGATAAATTCAGCAAGGTTATTGATTTTTACAGA
GAAGCAGATACTAAGAATGTTGTGAGAAAGTCTGATATGTTTAGAGGTATGGAGTTCTAC
ATTGTAAACGTCGATGATTCAATTGCTAACAAGCCCTATCTTGAAAGTAGAATAGTTGAG
CATGGTGGAACTAGAGTGTAAAACCTCAGACCCACAACTACTCATATAGTAGCGGCACAT
ATCGACTTCAAAGTAAAGATTCTTATTGAGAAATTGAATATGAACATAGTTAAGTTTAAT
TGGGTCTTGGCTTGTATTGAAAGAGGGTTCTTAGTTGATTTAGAACCTGTGTACATGCTG
CACGCTAATGAGAAGCTATTAGAGTATTTTAGAGATAATCTAGACCCTTATAACGATCAT
TACACTCAATTTGTTGATCCAAAACGGCTGACCGAAATCCTTGATTAAATCCCTAATGAT
AAAATTGAGTTTTAAATAATCGATACAGACCCAGATATCGAATAAATCTTCACTCAGGTA
GGATGCAGAGGTCTCTTCTATGGTAAAAAGTTTTATTTAATTCGATCTGAGGGGGTTTTG
GAACAAATGACAACCTAATTTGACATGGAAATCGAGTACTAAAGTTTGTTACATGCTAAA
TTTGCTGGATACTATAGGAAATAGCATTTGCAGTTATCCGAGTAGAAAAGTGGGAAAGAT
GTTAAACATAAAAATCTCATGTTTAACAAGTTATAAAATGAAGAAGATTAAGTAGTAGTA
AAATGTGTTGATAAAATTATGAAGATGGAAGAGTTCAATGTTTTAAGTAAGCTTCGATTA
TATGGAGCAATCCTCTTAGATTCATTGCCATCATCTCAGCACTTAACACAAGATCATGTT
GATTATATAATCTTGACTGATAGAGTGGGCGATAAGGAAGATATTTAGAAAATAAAGTAA
GTCGCCTAGCGTAGAGGATTATAAGTTGTTGATATCAAATGGCTTGCTGATAAAATGAAA
CAATTCGAAGATAAAATTATTAATGATGAAGCTGATGATAACGATATAAATAATCATGAT
GAAAAGATTATATAAGATAAAGAACAGTCCAAAAGTAGTGATAAAATAGGAGATTTTAAG
CTAAAAGATAAAGATTAAAGTGAGAAAAAACCTGTAAATAAAAAAAGTGTAGATAAGAGA
AAGAGAGATAGTGATGATGAAATAATGAGGGCTCTTGATAGATTTAATGAAGATATATCA
ATGAGTCTGAGTTGA

>Contig17485.0.g101(protein)
MQESKTRTNKSGSNEVVSFYEKRKSDDQKTDVKLSSFIQLLDRLGQSQKTQQKLLLIEKF
IEQFYSAHDHRQIFQFMRLLMSNLDRERGNYGLKESALAKFYSEILLLPPAEADRLKHWK
NPTKQPIGSPAGDFVGVLVHVMKNRARNDSKLTLNQLNQLLDQLARSFDNEKKKQILARI
VQDTTIDEQKWIARIILKDLKIGIGYETILKSYHPDALELFNATSDLRSVFEELQVQEDQ
VRQGSGGNQQMFRMFFPIKPMLAGKLAPQQIAEMVRKEGKVLIENKFDGERIQCHMQDGV
VKFFTRNSNNYTRIYGPGMSKYIKENVDAQAVILDGEMIVWDNQKNQVAPFGQNKQVALR
EYGVYENAPPEKPFKVKQQHQQDGDNQSETTKSQSAADGSHLQLCYKVFDILYIKAHGDS
EEINLMGARLQDRKTVLSRIIKEVPNTLEIEMGKECETVDQVFDEFNQSIYKNEEGIIIK
KIESVYKPNERSVNWIKLKGEYIDSLGDTLDLIVIGGYFGERKRIGGNDWTDHINVFLVG
VMKKLDKQNPQNCVVYPFSRVGTGYSMDELSKLRNQLKPYWKMYDARMPPALYGRWVPSM
SDRPDVYITDVSKSVILEIRAGELVVSDQYPTMYTLRFPRVLKIRYDKNWDEAFSHYDLQ
DMIKNFQESRRLKKKDNAKGIYEHNDEDEDEQQDGKKKRKNKKRAISEEELKSRDGQASE
DGQIYITHKDKFSKVIDFYREADTKNVVRKSDMFRGMEFYIVNVDDSIANKPYLESRIVE
HGGTRVQNLRPTTTHIVAAHIDFKVKILIEKLNMNIVKFNWVLACIERGFLVDLEPVYML
HANEKLLEYFRDNLDPYNDHYTQFVDPKRLTEILDQIPNDKIEFQIIDTDPDIEQIFTQV
GCRGLFYGKKFYLIRSEGVLEQMTTQFDMEIEYQSLLHAKFAGYYRKQHLQLSEQKSGKD
VKHKNLMFNKLQNEEDQVVVKCVDKIMKMEEFNVLSKLRLYGAILLDSLPSSQHLTQDHV
DYIILTDRVGDKEDIQKIKQVAQRRGLQVVDIKWLADKMKQFEDKIINDEADDNDINNHD
EKIIQDKEQSKSSDKIGDFKLKDKDQSEKKPVNKKSVDKRKRDSDDEIMRALDRFNEDIS
MSLS