Identifiers and Description

Gene Model Identifier

Contig12570.0.g36

Standard Name

SMARCA1c

Aliases

Contig12570_0_g36

Description

SNF2 family N-terminal domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• DNA binding (IEA) | GO:0003677
• nucleic acid binding (IEA) | GO:0003676
• helicase activity (IEA) | GO:0004386
• ATP binding (IEA) | GO:0005524

Domains

• ( pfam00176 ) SNF2 family N-terminal domain
• ( pfam00271 ) Helicase conserved C-terminal domain
• ( pfam00249 ) Myb-like DNA-binding domain

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00137610	9.997093137033517e-262	SNF2 family N-terminal domain containing protein
SGD	YOR304W	6.000153576809675e-162	ISW2 SGDID:S000005831, Chr XV from 884514-887876, Genom...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig12570.0.g36(coding)
ATGATGCAGTAAAAGAGTGAATCCCAAAATAGATTAGATGAGTTATTGAAGAAAGCTGAG
TAGTATACAAGACTCATCTTTTTAAAGCAAGCTAAAAAGCCAGCAAAAAATCAAGCTAAT
AAAAAGGATGAAGGTAAATCTTCAAAGAGAAAGCATGATCACAGAAAAAGCTAGGACATT
GATGACATGCAAAACGAAGAGAGTTAAGGAGGAGAGAGTATTAGATTCACAGATTAGCCT
AGCATGTTGAAGGGTGGAAAACTCATGCCTCATCAAATTGACTCTTTAAACTGGATGATA
ACTCTATATGACTTAGGACTCAATGGAATTCTTGCTGATGATATGGGTTTGGGTAAAACC
ATCCAAGCAATCTCTATGATGGTGTACCTCTATCAGTACAAAAAGGTTTAGGGACCTCAC
TTGATTATTACTCCCAAGTCAACAATCAGTAATTGGATGAAAGAGTTTGAGAAATGGGCT
CCTTTCTTGAAAGTAGTCAACCTCATCCCCACTATGGAACACAGAAAGGAAATCCTGAAA
GAGTAAATGTAACCTGGTACATTCAATGTCTGTGTGACAACCTATGAAGGTGTGAACATT
TGCTCAGGAGCTTTACAAAAGTATGACTGGCACTATTAAGTTTACGATGAAGCTCACAAG
CTCAAAAACATTGATGCCAAAATCAGTCTAACCTCAAGAAAGCTTTCTTGTAGAAATAGG
ATATTAATGACTGGAACTCCACTACAAAATAACTTAAGAGAGTTGTTTGGAATACTCAAC
TACTTAATGCCTGAAATTTTCGGTTCAGAGGATGACTTTAATGACTGGTTTTGTATTGAA
GATCCAAGTGTGGGACAGAAGATGACTATAGATTCCATTTAGAAACTTCACAAGATTTTG
AGGCCATTTTTGTTGAGAAGAGTCAAGAAAGATTTAGAAGTCAAACTTCCAGACAAAATT
GAGATAAATGTGAAAATCAATATGACTAAGATGTAATTGGAGTTATATGAACAACTCTTA
AAGACCACCAGCATTTTCAATAATAAAAATACCACTGTGAAAACCTACTTCAATTTACTC
ATGCAACTAAGAAAAGCATGTAATCATCCATACCTTTTTGATGGGATAGAACCTGAGGGA
GCTGAAGAATACGGTGAACACATTGTTGACAATTGTGGAAAGATGAGATTCTTAGATAAG
CTTCTTAAGAAAATATCCTCACAAAAAGAATAAGTCTTGATTTTTTCATAATTTACCTCA
GTCTTAGATATCATTGAAGACTATTGCTTAATGAGAGGTTTCCAATTCTGCAGACTTGAT
GGTACCACTGATCTAGAAGAAAGAGAAAGAATGATCACTGAATTTACAGCACCTAATTCA
GAGTTATTCATATTCTTGCTTTCAACAAAGGCTGGTGGTCTTGGTCTCAACTTAATGTCA
GCAAATCATGTGGTAATTTATGACTCTGACTGGAATCCTCAAGTTGATCTTCAAGCTATG
GACAGAGCTTATCGTATCGGTTAGAAAAAGGACGTTTTCATCTATCGATTGATCACTAAG
CCTTCAATTGAAGAAAAGATCATTGAGAGATAAGCTATTAAACTCAAGCTGGATTAAGTT
ATCATTCAGCAAGGAAAAACTGCCTCTATCTCAAGTAACTTGAGCAAAGATGAGTATGAA
AAGATTCTTCTCGCTGGTGCTGCTCTGATCCTTTAGCAAAAGTAGTAAGCTTTCCAAGAG
GAAGAAATCGATATAGATAAACTTATAGAAGAGGGAGTTTAAGTCGCTAGACAACTAAAG
GAAAATGCTGAAAAGCAAGCTGATTAGATTTCAAATAGCTTCGATTTCTCATACAACCGA
ACTGACCTTTTGTAATTTCAAGACGTCGATTACAGAGCAGAAAAGGGAAAGTTTTAAGAG
ATTTGGAAATTGGAGCAATAGAAAAAGATATTTGATGCTTAGAAACATTTAACAGATACA
GAAGGGTTATATAACAGGCAAAGGAGATATGCTGCAATGCAAAAATATTAAGACCAACCT
GCTATGTACAATTTGGATAATCAAAAGAAGGGTACGAGAGATCCTGATTATGTGTTGCCT
CCAAAAAAGCAAAAGCTTACTATGCTTGCAGCTGTGTATGACTTCCAGTTCTATTAAGAA
TATGATCTCATTAAGGAATAGATTGCCTACCTCAAAGAAAAAATTAACTAGAGAGAATTG
GTCACTGATGAAGAGCTTAATTCTTTAAAAGAGTTATTGAGTACAGGTTTTCATAATTGG
ACCATAAAAGAGTATTAAAAATTTGTGAAAGCTATCAGAAAGTTTGACATGCTGGATATC
AAGTCCATAGCTGAGTATATTGAAACTAAGACCGAGGAAGAAGTTCAAGAGTATATGAAT
GTTTTTCTTCTCAGATTCAAAGAGCTTAAAGAAAAAGATGTAGTCTTGTCAAAAATCTAC
AACATGAATCTTGAGTAGAAGATTCTTGAGACTATCAGAGACTTTGATATAAACAAAAAC
TATGTGATGCTTTTGCAAGAGAACAACTACTACAACAGAAATTTGTATTTGGCTACAATC
GAGAAAGAGCACAACAAGATGGTCAACCCTGGAAAGAAGGAAAAGCCTCAAGATTTGCAA
TTGAAGATTGATCACTTCTTTCACTCTTAAACTTCTAAGATGGTGTAGGAACAATTGAGA
TATATCGCTTTAGCAGTCAGAGCTGAGGATACACTGAGAGGACATTTGTCTCACCAAAAT
GAGAGAAAGAGAATGAGAGCTATGATTGAGAGATCAAAGCAATTCAGTCAAGGTTACTAG
GAAGGAATTTCTGCAAAAGAAAAAGATTTAGTTAAGAATGATGCTGCAAAAGAAATTAAG
CAAGAATCACACTAAGTCAAGAGAGTTGGACCAATTGATGAGAACCTCAAGTATGGAAGG
AGAAAGAAAACTGCTAATCTATTCAAGAATACTTAGTGA

>Contig12570.0.g36(protein)
MMQQKSESQNRLDELLKKAEQYTRLIFLKQAKKPAKNQANKKDEGKSSKRKHDHRKSQDI
DDMQNEESQGGESIRFTDQPSMLKGGKLMPHQIDSLNWMITLYDLGLNGILADDMGLGKT
IQAISMMVYLYQYKKVQGPHLIITPKSTISNWMKEFEKWAPFLKVVNLIPTMEHRKEILK
EQMQPGTFNVCVTTYEGVNICSGALQKYDWHYQVYDEAHKLKNIDAKISLTSRKLSCRNR
ILMTGTPLQNNLRELFGILNYLMPEIFGSEDDFNDWFCIEDPSVGQKMTIDSIQKLHKIL
RPFLLRRVKKDLEVKLPDKIEINVKINMTKMQLELYEQLLKTTSIFNNKNTTVKTYFNLL
MQLRKACNHPYLFDGIEPEGAEEYGEHIVDNCGKMRFLDKLLKKISSQKEQVLIFSQFTS
VLDIIEDYCLMRGFQFCRLDGTTDLEERERMITEFTAPNSELFIFLLSTKAGGLGLNLMS
ANHVVIYDSDWNPQVDLQAMDRAYRIGQKKDVFIYRLITKPSIEEKIIERQAIKLKLDQV
IIQQGKTASISSNLSKDEYEKILLAGAALILQQKQQAFQEEEIDIDKLIEEGVQVARQLK
ENAEKQADQISNSFDFSYNRTDLLQFQDVDYRAEKGKFQEIWKLEQQKKIFDAQKHLTDT
EGLYNRQRRYAAMQKYQDQPAMYNLDNQKKGTRDPDYVLPPKKQKLTMLAAVYDFQFYQE
YDLIKEQIAYLKEKINQRELVTDEELNSLKELLSTGFHNWTIKEYQKFVKAIRKFDMLDI
KSIAEYIETKTEEEVQEYMNVFLLRFKELKEKDVVLSKIYNMNLEQKILETIRDFDINKN
YVMLLQENNYYNRNLYLATIEKEHNKMVNPGKKEKPQDLQLKIDHFFHSQTSKMVQEQLR
YIALAVRAEDTLRGHLSHQNERKRMRAMIERSKQFSQGYQEGISAKEKDLVKNDAAKEIK
QESHQVKRVGPIDENLKYGRRKKTANLFKNTQ