Identifiers and Description

Gene Model Identifier

Contig21538.0.g90

Standard Name

BRCA1

Aliases

Contig21538_0_g90

Description

PHD-like zinc-binding domain

Genome Browser

Genome Browser (Micronucleus)

Micronuclear Genome Browser

Gene Ontology Annotations

Molecular Function

• protein binding (IEA) | GO:0005515
• phosphogluconate dehydrogenase (decarboxylating) activity (IEA) | GO:0004616

Biological Process

• pentose-phosphate shunt (IEA) | GO:0006098
• oxidation-reduction process (IEA) | GO:0055114

Domains

• ( pfam13771 ) PHD-like zinc-binding domain
• ( pfam00628 ) PHD-finger
• ( pfam13832 ) PHD-zinc-finger like domain
• ( pfam13821 ) Domain of unknown function (DUF4187)
• ( pfam03446 ) NAD binding domain of 6-phosphogluconate dehydrogenase

Gene Expression Profile

Homologs

Source	Identifier	Score	Description
T. thermophila	TTHERM_00582100	9.99967697349061e-30	PHD-finger family protein
SGD	YPR031W	0.00000005999527666938375	NTO1 SGDID:S000006235, Chr XVI from 631515-633761, Geno...

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>Contig21538.0.g90(coding)
ATGAAAATAAAATAGAAATTAATGTAGGTTTTAAGCATCGTAGAAATTTGTGTTAATGAA
AAAGTCCGCAAGATTGATGCTATTTTGGATTTAGCGCTCTCTGCAAACTTAATAGATTTT
AAGAAACATTTATTGACTTAATCTAAGCTTTCATCAACTTAGTATGATAAATACCTGCTC
TTGATTTAAACTGATAAATTGAAAATAACATACTAAGAATCAGATGAGATAATAGAGTAA
AGACCAAAATATCATGAGGTTTATGAAGCAATAGCTGACGATGTGAATTTGATGCATTAG
ATAGTTTAAGTTGTTCATCAAAACAGAAAATTGATATTTTAACTTAAGAGGTTCACTAAT
CAATACTTATCAGTACTTGACCCAAGCAATTCCTAAACTCATACTAAGAGACGCCTAATA
AAAGCTACAAAGGCTAAAAATGTGATAGAATTCGATAAGGATGGATAAGTAGTCAGAGAC
AAGTTGTAAGTGTTGCAAGAAAGACCCAGATATAAAATACATCCAATTGAGTCAGGTTAT
GAATACTGCTACTTCTGTAAAACCTCGTCAAGAGATGAGGAGCTTAGGGTTAAATGTGGA
CCAGTTTATGGTCCTATTAGGGCTGGAGATAAGAGTATATTTTTGCATGAACTCTGTGCA
CTTTGGACTCCAGAGATATTCCTTGACGGTAAAAACAAATTCAAAAATCTATCAAAAGCT
ATTAAACGATGCAAGAAAATCAAATGCTCATGTTGTAAGGAAAAGGGTGGTGGCCTGGGT
TGCTTTGTAAAGTCTTGTGATAAAAGTTATCATTACTTATGTGCAAAAGTGAGCAACTGC
CTGTTCGTGAATTCCAGATTTATCATCTACTGTGAGAATCATAGGAATGAAGCACCCGAG
GAATACTTAGAGGAGGAGAAAATCGAAGAGGATTAAGATGACTAGCTGTAGCATTATATT
TGCTCAATATGCAAAAGTGGATTGGATGAATAAGTGATAATGATATGTGAGGGATGTGAC
AAGGGTTTTCACTCTAATTGCCACTAGCCTCCAATTAACATAGAAAATATTGATGAGGAT
GAAGAGTGGTTTTGCAGAGATTGTCAAGAGGAGCAAAACGATAGATAACAAAACGATGAG
ATGATAATTAATACGTGA

>Contig21538.0.g90(protein)
MKIKQKLMQVLSIVEICVNEKVRKIDAILDLALSANLIDFKKHLLTQSKLSSTQYDKYLL
LIQTDKLKITYQESDEIIEQRPKYHEVYEAIADDVNLMHQIVQVVHQNRKLIFQLKRFTN
QYLSVLDPSNSQTHTKRRLIKATKAKNVIEFDKDGQVVRDKLQVLQERPRYKIHPIESGY
EYCYFCKTSSRDEELRVKCGPVYGPIRAGDKSIFLHELCALWTPEIFLDGKNKFKNLSKA
IKRCKKIKCSCCKEKGGGLGCFVKSCDKSYHYLCAKVSNCLFVNSRFIIYCENHRNEAPE
EYLEEEKIEEDQDDQLQHYICSICKSGLDEQVIMICEGCDKGFHSNCHQPPINIENIDED
EEWFCRDCQEEQNDRQQNDEMIINT